CF834589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.064e-50 Identity = 99/179 (55.31%), Postives = 120/179 (67.04%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 V++GS KKP EDPV+TN+IPRQ+P+Q WYMNP SIL+GGILPFGAVFIEL FILTS+W NQ VT AEI+IV+CYFQLC+ED+ WWWRS+LT+GSS L ITK +S +L F Y I S AF LTGTIGFY+C++ R IYSS+ I+ Sbjct: 464 VFLGSYFASKKPVPEDPVRTNQIPRQVPDQIWYMNPYLSILMGGILPFGAVFIELHFILTSLWDNQFYYIFGFLFIVLMILIVTSAEISIVMCYFQLCAEDHHWWWRSFLTAGSSSLYMFIYSVSFFRY-LGITKFISSLLDFSYSFIMSLAFAALTGTIGFYSCYFLVRKIYSSIHIN 641
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.307e-50 Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 ++G+ GFKK AIE PV+TN+IPRQIPEQ++Y P+ I++GGILPFG +FI+LFFIL SIW +Q +TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+IT S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 486 FIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.307e-50 Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 ++G+ GFKK AIE PV+TN+IPRQIPEQ++Y P+ I++GGILPFG +FI+LFFIL SIW +Q +TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+IT S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 486 FIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.307e-50 Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 ++G+ GFKK AIE PV+TN+IPRQIPEQ++Y P+ I++GGILPFG +FI+LFFIL SIW +Q +TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+IT S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 485 FIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.307e-50 Identity = 94/178 (52.81%), Postives = 119/178 (66.85%), Query Frame = -1 Query: 274 YVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 807 ++G+ GFKK AIE PV+TN+IPRQIPEQ++Y P+ I++GGILPFG +FI+LFFIL SIW +Q +TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+IT S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 486 FIGAYFGFKKNAIEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.488e-48 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 VY+G GF+K ++PV+TN+IPRQIPEQ WYMN IL+ GILPFGA+FIELFFI ++IW NQ V+C++I+IV+ YFQLC+EDY+WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 465 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.488e-48 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 VY+G GF+K ++PV+TN+IPRQIPEQ WYMN IL+ GILPFGA+FIELFFI ++IW NQ V+C++I+IV+ YFQLC+EDY+WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 464 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.488e-48 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 VY+G GF+K ++PV+TN+IPRQIPEQ WYMN IL+ GILPFGA+FIELFFI ++IW NQ V+C++I+IV+ YFQLC+EDY+WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 465 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 6.488e-48 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 VY+G GF+K ++PV+TN+IPRQIPEQ WYMN IL+ GILPFGA+FIELFFI ++IW NQ V+C++I+IV+ YFQLC+EDY+WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 464 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF834589 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 6.488e-48 Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 274 VYVGSLVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 810 VY+G GF+K ++PV+TN+IPRQIPEQ WYMN IL+ GILPFGA+FIELFFI ++IW NQ V+C++I+IV+ YFQLC+EDY+WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 464 VYLGYYFGFRKQPYDNPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642 The following BLAST results are available for this feature:
BLAST of CF834589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834589 ID=CF834589; Name=CF834589; organism=Citrus sinensis; type=EST; length=810bpback to top |