CF834642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834642 vs. ExPASy Swiss-Prot
Match: VATH_ARATH (V-type proton ATPase subunit H OS=Arabidopsis thaliana GN=VHA-H PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.112e-82 Identity = 156/238 (65.55%), Postives = 176/238 (73.95%), Query Frame = 3 Query: 3 RLFPYKSLASEDTYEPFLRLLWKGNWFIQEKSCKILASIVSARPKPQDRFFANGEASNSKSKSTTIDDVLKLLVEWLCAQLKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPASTQQSIQLLYETCLCVWLLSYYEPAVEYLATTRTLPRLIDXXXXXXXXXXXXXXXLILRNLLPKGNFAAQMIDLGLPQVVQSLKAQAWSXXXXXXXXXXXXXXXKDNIKRL 716 RLF +SLA+EDTYEPFLRLLWKGNWFIQEKSCKILA I+SARPK + NG IDDVLK LVEWLCAQLK+PSHP+RGVP+AI+CL++LLKEP+VRSSFVQADGVKLL PLISPASTQQSIQLLYETCLC+WLLSYYEPA+EYLAT+RT+ RL + L RNLLPKG F AQM+DLGLP ++ SLK QAWS KD IK+L Sbjct: 93 RLFHDESLANEDTYEPFLRLLWKGNWFIQEKSCKILAWIISARPKAGNAVIGNG-----------IDDVLKGLVEWLCAQLKQPSHPTRGVPIAISCLSSLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTMQRLTEVVKHSTKEKVVRVVILTFRNLLPKGTFGAQMVDLGLPHIIHSLKTQAWSDEDLLDALNQLEEGLKDKIKKL 319
BLAST of CF834642 vs. ExPASy Swiss-Prot
Match: VATH_ORYSJ (Probable V-type proton ATPase subunit H OS=Oryza sativa subsp. japonica GN=Os07g0549700 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.077e-77 Identity = 144/237 (60.76%), Postives = 175/237 (73.84%), Query Frame = 3 Query: 6 LFPYKSLASEDTYEPFLRLLWKGNWFIQEKSCKILASIVSARPKPQDRFFANGEASNSKSKSTTIDDVLKLLVEWLCAQLKKPSHPSRGVPVAINCLAALLKEPMVRSSFVQADGVKLLTPLISPASTQQSIQLLYETCLCVWLLSYYEPAVEYLATTRTLPRLIDXXXXXXXXXXXXXXXLILRNLLPKGNFAAQMIDLGLPQVVQSLKAQAWSXXXXXXXXXXXXXXXKDNIKRL 716 LF SL+ ED Y+PFLRLL KGNWF+QEKSCKIL I+SARPK Q+ NGEASNSKSK T+ DVL+ LV+WLC+QL+ P+HP+ VP A++CLA LL+E VR+ FVQADGVKLL PLISPASTQQSIQLLYETCLC+WLLS+Y+ AV+YL+TTR +PRL++ + +RNLL KG FAAQMIDLGLP +VQ+LKAQAW+ KDN+K+L Sbjct: 94 LFYDNSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTQIISARPKMQNGIVPNGEASNSKSKLTSTQDVLRGLVDWLCSQLRNPTHPNCSVPTAMHCLATLLREQYVRALFVQADGVKLLIPLISPASTQQSIQLLYETCLCIWLLSFYDAAVDYLSTTRVMPRLVEVVKGSTKEKVVRVVIMSIRNLLAKGAFAAQMIDLGLPHIVQNLKAQAWTDEDLLDALNQLEIGLKDNLKKL 330 The following BLAST results are available for this feature:
BLAST of CF834642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834642 ID=CF834642; Name=CF834642; organism=Citrus sinensis; type=EST; length=718bpback to top |