CF834886
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834886 vs. ExPASy Swiss-Prot
Match: SF3A1_ARATH (Probable splicing factor 3 subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.497e-31 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = -1 Query: 349 AQHPGPVSVTVAVPNVDEGNLKGQLLEIAMQSLSETVGSLKEKISGEIQLPANKQKLSGKGGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 627 AQHPGP ++ V+ PN ++G Q +EI +QSLSE VGSLKEKI+GEIQ+PANKQKLSGK GFLKDNMSLA+YNV GE LTLSLRERGGRKR Sbjct: 697 AQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
BLAST of CF834886 vs. ExPASy Swiss-Prot
Match: SF3A1_HUMAN (Splicing factor 3 subunit 1 OS=Homo sapiens GN=SF3A1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 349 QHPGPVSVTVAVPNVD---EGNLKGQLLEIAMQSLSETVGSLKEKISGEIQLPANKQKLSGKGGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 624 ++ GPVS+ V VPN+ E L GQ+L + L++ V +K KI +PA KQKL +G F+KD+ SLAYYN+ G + L+L+ERGGRK+ Sbjct: 700 RNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of CF834886 vs. ExPASy Swiss-Prot
Match: SF3A1_BOVIN (Splicing factor 3 subunit 1 OS=Bos taurus GN=SF3A1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 349 QHPGPVSVTVAVPNVD---EGNLKGQLLEIAMQSLSETVGSLKEKISGEIQLPANKQKLSGKGGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 624 ++ GPVS+ V VPN+ E L GQ+L + L++ V +K KI +PA KQKL +G F+KD+ SLAYYN+ G + L+L+ERGGRK+ Sbjct: 700 RNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of CF834886 vs. ExPASy Swiss-Prot
Match: SF3A1_MOUSE (Splicing factor 3 subunit 1 OS=Mus musculus GN=Sf3a1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 349 QHPGPVSVTVAVPNVD---EGNLKGQLLEIAMQSLSETVGSLKEKISGEIQLPANKQKLSGKGGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 624 ++ GPVS+ V VPN+ E L GQ L + L++ V +K KI +PA KQKL +G F+KD+ SLAYYN+ +G + L+L+ERGGRK+ Sbjct: 698 RNKGPVSIKVQVPNMQDKTEWKLNGQGLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIHLALKERGGRKK 791 The following BLAST results are available for this feature:
BLAST of CF834886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834886 ID=CF834886; Name=CF834886; organism=Citrus sinensis; type=EST; length=627bpback to top |