CF835151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.226e-21 Identity = 51/68 (75.00%), Postives = 52/68 (76.47%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGDPNL FVE PALAPPEVQID ASQPLPDDDDDAF+ Sbjct: 142 AKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFD 209
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.226e-21 Identity = 51/68 (75.00%), Postives = 52/68 (76.47%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGDPNL FVE PALAPPEVQID ASQPLPDDDDDAF+ Sbjct: 142 AKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAQAASQPLPDDDDDAFD 209
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 50/68 (73.53%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEVQID A+QPLPDDDDDAFE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20 Identity = 49/68 (72.06%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGDPNL FVE PALAPPEVQID ASQPLPDDDD+ F+ Sbjct: 154 AKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.566e-20 Identity = 50/68 (73.53%), Postives = 50/68 (73.53%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEVQID ASQPLPDDDDD FE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.038e-19 Identity = 48/68 (70.59%), Postives = 50/68 (73.53%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEVQID +QPLPDDDD+AFE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVQIDLAAQALHEQELQAALNQPLPDDDDEAFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19 Identity = 48/68 (70.59%), Postives = 50/68 (73.53%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEV +D A+QPLPDDDDDAFE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDQNLHFVESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19 Identity = 48/68 (70.59%), Postives = 50/68 (73.53%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEV ID A+QPLPDDDD+AFE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.943e-19 Identity = 48/68 (70.59%), Postives = 49/68 (72.06%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEV ID A+QPLPDDDDD FE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDQNLHFVETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221
BLAST of CF835151 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18 Identity = 47/68 (69.12%), Postives = 49/68 (72.06%), Query Frame = -1 Query: 288 AKSNYNFEKPFLYLARKLAGDPNLPFVECPALAPPEVQIDXXXXXXXXXXXXXXASQPLPDDDDDAFE 491 AKSNYNFEKPFLYLARKLAGD NL FVE PALAPPEVQID A+ LPDDDD+AFE Sbjct: 154 AKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQLHEQELLQAAAHALPDDDDEAFE 221 The following BLAST results are available for this feature:
BLAST of CF835151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835151 ID=CF835151; Name=CF835151; organism=Citrus sinensis; type=EST; length=491bpback to top |