CF835260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835260 vs. ExPASy Swiss-Prot
Match: GIGAN_ARATH (Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2) HSP 1 Score: 329.717 bits (844), Expect = 9.313e-90 Identity = 175/241 (72.61%), Postives = 197/241 (81.74%), Query Frame = 1 Query: 7 EQIELSAAEATIEATAQGIASVLCAHGPEVEWRI*TIWEAAYGLITLSSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEAIIKRTFPPESSPENTRRARHLSGIGSASKNLAVAELRTMVHSLFLESCASVELASRLLFIVLTVCVSHEAQSNGSKKPRGE-----ENYFPDESTEDLQ-KDLRTRKVKRQGPVAAFDSYXXXXXXXXXXELQLVPLV 711 +QIE+ AAEATIEATAQGIAS+LCAHGPEVEWRI TIWEAAYGLI L+SSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVE I+ RTFPPESS E TR+AR SA+KNLA++ELR MVH+LFLESCA VELASRLLF+VLTVCVSHEAQS+GSK+PR E EN ++ + Q + ++R VK QGPVAAFDSY E+QL P++ Sbjct: 429 KQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPPESSRELTRKARSSFTTRSATKNLAMSELRAMVHALFLESCAGVELASRLLFVVLTVCVSHEAQSSGSKRPRSEYASTTENIEANQPVSNNQTANRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMI 669
BLAST of CF835260 vs. ExPASy Swiss-Prot
Match: GIGAN_ORYSJ (Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2) HSP 1 Score: 307.76 bits (787), Expect = 3.790e-83 Identity = 160/235 (68.09%), Postives = 189/235 (80.43%), Query Frame = 1 Query: 10 QIELSAAEATIEATAQGIASVLCAHGPEVEWRI*TIWEAAYGLITLSSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEAIIKRTFPPESSPENTRRARHLSGIGSASKNLAVAELRTMVHSLFLESCASVELASRLLFIVLTVCVSHEAQSNGSKKPRGEENYFPDESTEDLQ-KDLRTRKVKRQGPVAAFDSYXXXXXXXXXXELQLVPLV 711 Q+E+ A+EATI+ATAQGIAS+LCAHGP+VEWRI TIWEAAYGL+ LSSSAVDLPEI+VA PLQPP LSW+LY+PLLKV EYLPRGSPSEACLM+IFVATVEAI++RTFP E+S E +R+ R S SKNLAVAELRTM+HSLF+ESCAS++LASRLLF+VLTVCVSH+A GSK+P G +N+ +E T D + + R R KRQGPVA FDSY ELQL P + Sbjct: 433 QLEVPASEATIDATAQGIASMLCAHGPDVEWRICTIWEAAYGLLPLSSSAVDLPEIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRIFVATVEAILRRTFPSETS-EQSRKPR------SQSKNLAVAELRTMIHSLFVESCASMDLASRLLFVVLTVCVSHQALPGGSKRPTGSDNHSSEEVTNDSRLTNGRNRCKKRQGPVATFDSYVLAAVCALSCELQLFPFI 660 The following BLAST results are available for this feature:
BLAST of CF835260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835260 ID=CF835260; Name=CF835260; organism=Citrus sinensis; type=EST; length=711bpback to top |