CF835367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 36/96 (37.50%), Postives = 49/96 (51.04%), Query Frame = -2 Query: 387 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAFN 674 A+W WMTP + +PS HD G W P+ D + R P +G NI+ G CG G D + N + Y Y D+LG+G L C +Q+ FN Sbjct: 238 ALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGY-----GSNLDCYDQRPFN 327
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 A+W WMTP + +PS HD +G W+P+ D + R P FG NI+ G CG+G + + + Y Y +LGV P + L C Q++F Sbjct: 232 ALWFWMTP-QSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 320
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y +LGV P E L C Q++F Sbjct: 225 AIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGENLDCGNQRSF 313
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 A+W WMTP + +PS HD +G W+P+ D + R P FG NI+ G CG+G + + + Y Y +LGV P + L C Q++F Sbjct: 227 ALWFWMTP-QSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 315
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 AIW WMTP + ++PS+HD +G W P+ D + R P +G NI+ G CG G DA+ + + +Y Y +L V P E L C Q+ F Sbjct: 162 AIWFWMTP-QDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNV-----APGENLDCYNQRNF 250
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12 Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y +LGV P + L C Q++F Sbjct: 219 AIWFWMTP-QSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 307
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12 Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y +LGV P + L C Q++F Sbjct: 221 AIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 309
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y +LGV P + L C Q++F Sbjct: 221 AIWFWMTP-QSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 309
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.411e-12 Identity = 34/95 (35.79%), Postives = 49/95 (51.58%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 A+W WMTP + +PS HD +G W P+ D + R P FG NI+ G CG+G + + + + Y Y +LGV P + L C Q+ F Sbjct: 231 ALWFWMTP-QSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGV-----TPGDNLDCVNQRWF 319
BLAST of CF835367 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.066e-12 Identity = 36/95 (37.89%), Postives = 47/95 (49.47%), Query Frame = -2 Query: 390 AIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 674 A+W WMT ++ +PSAHD G W P+ D+ R P FG NI+ G C G M+N + Y Y +LGV P L CA Q+ F Sbjct: 157 ALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGV-----DPGNNLDCANQRPF 245 The following BLAST results are available for this feature:
BLAST of CF835367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835367 ID=CF835367; Name=CF835367; organism=Citrus sinensis; type=EST; length=675bpback to top |