CF835390
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.701e-32 Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 3 Query: 102 MSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 MSCNGC VLRKGC ENC+LR IQWI +P AQ +ATVF A+ FGRAGLMSFISAVPE+Q P+LF SL+YEA G TVNPV+GAV LLW Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLW 87
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.314e-31 Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = 3 Query: 102 MSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 MSCNGC VLRKGC ENC+LR IQWI T AQ +ATVF A+ FGRAGLMSFISAVP++QRP+LF SL+YEA G TVNPV+GA+ +LW Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLW 87
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.739e-29 Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 3 Query: 102 MSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 MSCNGC VLRKGC E C+LR +QWI + +Q +ATVF A+ FGRAGLMSFIS+VPE QRP+LF SL++EA G TVNPV+GAV +LW Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLW 87
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.399e-25 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 96 INMSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 + MSCNGC VLRKGC ENC +R +QWI + +QANATVF A+ +GRAGLM+ ++ P+ RP++F SL+YEA G VNP+ G+V LLW Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLW 89
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.093e-25 Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 96 INMSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 + MSCNGC VLRKGC E+C +R + WI +P AQANATVF A+ +GRAGLM+ I+A P RP +F SL++EA G VNP+ G+V LLW Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLW 89
BLAST of CF835390 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.008e-23 Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 96 INMSCNGCTVLRKGCRENCMLRQSIQWIGTPPAQANATVFDAQLFGRAGLMSFISAVPETQRPSLFHSLVYEAVGTTVNPVSGAVRLLW 362 + +SCNGC VLRKGC ++C +R +QWI + +QANAT+F A+ +GRAGL++ I + P+ RP++F SL+YEA G VNPV G+V L+W Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMW 89 The following BLAST results are available for this feature:
BLAST of CF835390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835390 ID=CF835390; Name=CF835390; organism=Citrus sinensis; type=EST; length=362bpback to top |