CF835406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.315e-30 Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 + +LAPCI Y+R GG +P CCNG+R++N ARTTPDRQ ACNCLKQ + S+P +NPNNA LP CGV+IPY+IS ST+C V+ Sbjct: 33 SSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117 HSP 2 Score: 29.261 bits (64), Expect = 5.315e-30 Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = -3 Query: 446 AALKLVSALVLCMLVIGPLSGQAITCGQ 529 A KL + LCM+V P++ QAITCGQ Sbjct: 5 AMTKLALVVALCMVVSVPIA-QAITCGQ 31
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.006e-29 Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T SLAPCI Y+RSGG +P CCNG+R++N ARTT DRQTACNCLK AGSI +NPNNA GLP CGV++PYKIS ST+C V+ Sbjct: 31 TSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.896e-28 Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 + SLAPCI Y+R GG +P CCNG+R++N ARTTPDR+TACNCLKQ +GSI +NPNNA LP CGV+IPYKIS ST+C V+ Sbjct: 7 SSSLAPCIGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.427e-28 Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 + +LAPCI Y+R GG +P CCNG+R++N ARTTPDRQ ACNCLKQ + S+P +NPNNA LP CGV IPYKIS ST+C V+ Sbjct: 7 SSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.937e-27 Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI LN NNA LP CGV+IPYKIS ST+C V+ Sbjct: 25 TSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109 HSP 2 Score: 28.8758 bits (63), Expect = 3.937e-27 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 449 LVLCMLVIGPLSGQAITCG 505 LV+CM+VI P++ AI+CG Sbjct: 4 LVMCMVVIAPMAEGAISCG 22
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.182e-27 Identity = 58/85 (68.24%), Postives = 64/85 (75.29%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 + SLAPCI YLR+GG +P CCNGVRSLN AA+TT DRQ ACNCLK A SI LN N A GLP CGVS+PYKIS STDC V+ Sbjct: 7 SSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.059e-27 Identity = 56/86 (65.12%), Postives = 62/86 (72.09%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI LN NNA LP CGV IPYKIS ST+C V+ Sbjct: 33 TSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117 HSP 2 Score: 28.8758 bits (63), Expect = 5.059e-27 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 449 LVLCMLVIGPLSGQAITCG 505 LV+CM+VI P++ AI+CG Sbjct: 12 LVMCMVVIAPMAEGAISCG 30
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.084e-27 Identity = 52/83 (62.65%), Postives = 60/83 (72.29%), Query Frame = -1 Query: 187 SLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 435 +LAPC+ YL+ G CC GVR+LN+AA TTPDRQ ACNCLK AAGSI LN NNA LP C V+IPYKIS ST+C +R Sbjct: 33 ALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115 HSP 2 Score: 31.9574 bits (71), Expect = 5.084e-27 Identity = 13/31 (41.94%), Postives = 22/31 (70.97%), Query Frame = -3 Query: 440 MAALKLVSALVLCMLVIGPLSGQAITCGQGD 532 MA++K+V ++ +VI P++ AITCG+ D Sbjct: 1 MASMKVVCVALIMCIVIAPMAESAITCGRVD 31
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.134e-27 Identity = 51/85 (60.00%), Postives = 66/85 (77.65%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 + +LAPCI Y++ GG +P CCNG+R++N ARTT DR+ ACNCLKQ +GSIP +NPNNA LP CGV++PYKIS ST+C V+ Sbjct: 7 SSNLAPCINYVKGGGAVPPACCNGIRNVNNLARTTADRRAACNCLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91
BLAST of CF835406 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 8.575e-27 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 187 TGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCFKVR 441 T L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK AAGSI LN NNA LP CGV+IPYKIS +T+C V+ Sbjct: 33 TSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117 HSP 2 Score: 28.8758 bits (63), Expect = 8.575e-27 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 449 LVLCMLVIGPLSGQAITCG 505 LV+CM+VI P++ AI+CG Sbjct: 12 LVICMVVIAPMAEGAISCG 30 The following BLAST results are available for this feature:
BLAST of CF835406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835406 ID=CF835406; Name=CF835406; organism=Citrus sinensis; type=EST; length=561bpback to top |