CF835689
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.693e-33 Identity = 74/146 (50.68%), Postives = 97/146 (66.44%), Query Frame = -1 Query: 311 PAMAPGALV---GWGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 730 PA+ PG+L+ + ++K AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V +WTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 160 PAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.212e-33 Identity = 74/146 (50.68%), Postives = 97/146 (66.44%), Query Frame = -1 Query: 311 PAMAPGALV---GWGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 730 PA+ PG+L+ + ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 160 PAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 2.212e-33 Identity = 74/146 (50.68%), Postives = 97/146 (66.44%), Query Frame = -1 Query: 311 PAMAPGALV---GWGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 730 PA+ PG+L+ + ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 160 PAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.434e-32 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = -1 Query: 311 PAMAPGALV---GWGLLDPVQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 730 PA+ PG+L+ + +++ AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = -1 Query: 308 PAMAPGALVGWG---LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 730 PA P +LV + P++++ + CDN +K++K W +D L+ H DWVR VAWAPN+GLP S IAS SQD +V++WT + G W G+ L F VW VSWS+ GN+LAV+ +N VTLWKE VD EW+ +S VE Sbjct: 158 PAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVE 299
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = -1 Query: 308 PAMAPGALVGW------------GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-------------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 730 PA+ PG+L+ G V++ AS GCDNTVK+W+ + ALQ HSDWVR VA+APN+GLP+S +A+ASQD TV+IWT W L F VW VSWS++GN+LAV+ + +TLWKE + G W+ VS ++ Sbjct: 197 PAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVSEMD 363
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 69/149 (46.31%), Postives = 92/149 (61.74%), Query Frame = -1 Query: 308 APGALVGWGLLDPVQ-------KLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 721 AP A+ G L+ P+ ++ + GCDN VK+WK L H DWVR VAW+ ++ L KS IASASQD TV++WT +EG Q W+ ++L+D P VW VSWSL+GN+LAV+ +N VTLWKE + GEW+ VVE Sbjct: 153 APPAVSG-SLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSSV-LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVVE 297
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25 Identity = 66/146 (45.21%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 308 PAMAPGALVGWGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 730 P+ APG+++ Q+ + G DNT+K+W + C L H+DWV V W+P + L KS IASASQD TV IWT W+ RVLK+F T VW VSWSL+GN+LAV+ +N VTLWKE + GEW V+ +E Sbjct: 151 PSTAPGSIISTNATPAAQRRFVTGGSDNTLKIWSWDAASAQYRCEEGGVLSGHTDWVLDVDWSPTV-LQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFDTTVWRVSWSLSGNVLAVSSGDNKVTLWKENLKGEWACVNSLE 295
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24 Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = -1 Query: 308 LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 694 L D ++ S GCDN VK+W+ + A Q HSDWVR VAW+P+ L KS IA+ASQD TV+IWT + +WE + L K P W SWSL+GN+LA++ +N VTLWKE + G+W+ V+ Sbjct: 158 LPDNTRRFVSGGCDNLVKIWRYDDAAKTFIEEEAFQGHSDWVRDVAWSPSR-LSKSYIATASQDRTVLIWTKDGKSNKWEKQPLTKEKFPDVCWRASWSLSGNVLAISGGDNKVTLWKENIQGKWESAGEVD 288
BLAST of CF835689 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = -1 Query: 308 PAMAPGALVGWGL-LDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 730 PA +PG+LV + ++ + G DN +K+W + L+ HSDWVR VAW+P++ L KS IASASQD TV +WT A QW +VL +F +W VSWS +GN+LAV+ +N V+LWKE + G+W++V +E Sbjct: 167 PAASPGSLVSSNPGIGQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKVKDIE 308 The following BLAST results are available for this feature:
BLAST of CF835689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835689 ID=CF835689; Name=CF835689; organism=Citrus sinensis; type=EST; length=730bpback to top |