CF835895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.409e-47 Identity = 101/154 (65.58%), Postives = 109/154 (70.78%), Query Frame = -1 Query: 160 FIIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXLPQGPGEKAVPAPQPAEGAKKA 621 FIIRKPTKIHSRSRAR+MK AK KGR SGYGKRKG+REARLP K+ +KYRE+KKIDKHM HDMYM+VKGNVFKNKRVLMESI +SKAEKAREKTLSDQFEAKRAKN L +GPG P PA A A Sbjct: 49 FIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDVAPVAAPAPAATPA 202
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 186.422 bits (472), Expect = 9.918e-47 Identity = 105/160 (65.62%), Postives = 115/160 (71.88%), Query Frame = -1 Query: 154 FIIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXLPQGPG---EKAVPAPQPAE-GAKKAKK 621 FIIRKPTKIHSRSRAR++ AKRKGR SGYGKRKG+REARLP K+ +KYRE+KKID+HM HDMYMKVKGNVFKNKRVLMESI +SKAEKAREKTLSDQFEAKRAKN L +GPG A P Q AE AKK+KK Sbjct: 49 FIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDIPAAAPPAQTAEVPAKKSKK 208
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.295e-46 Identity = 105/160 (65.62%), Postives = 110/160 (68.75%), Query Frame = -1 Query: 154 FIIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAKNXXXXXXXXXXXXXXLPQGP--GEKAVP--APQPAEGAKKAKK 621 FIIRKPTKIHSRSRAR + EAKRKGR SGYGKRKG+REARLP KI KYRESKKID+HM HDMYMKVKGNVFKNKRVLMESI + KAEKAREKTL+DQFEAKR KN L QGP GE P APQ E KK K Sbjct: 49 FIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREERLAQGPGGGETTTPAGAPQQPEVTKKKSK 208
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster GN=RpL19 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 II+KP +HSR R R+ EA+RKGR G+GKRKG+ AR+P K+ +KYR+SKKID+H+ HD+YMK KGNVFKNKRVLME I + KAEK R K L+DQ EA+R K Sbjct: 50 IIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_MOUSE (60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_MACFA (60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
BLAST of CF835895 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = -1 Query: 271 IIRKPTKIHSRSRARRMKEAKRKGRPSGYGKRKGSREARLPPKIXXXXXXXXXXXXXRKYRESKKIDKHMSHDMYMKVKGNVFKNKRVLMESIPQSKAEKAREKTLSDQFEAKRAK 618 IIRKP +HSR+R R+ A+RKGR G GKRKG+ AR+P K+ R+YRESKKID+HM H +Y+KVKGNVFKNKR+LME I + KA+KAR+K L+DQ EA+R+K Sbjct: 50 IIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165 The following BLAST results are available for this feature:
BLAST of CF835895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835895 ID=CF835895; Name=CF835895; organism=Citrus sinensis; type=EST; length=621bpback to top |