CF835908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.502e-35 Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RKLS AL AAS ACDHIRDWV GTP+G +VS G Y DGSYNVP G+IYSFPVT NGEW I QGL+IDEFSRKKLDLT EEL+EEK L +SC Sbjct: 235 IIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAHSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 73/96 (76.04%), Postives = 77/96 (80.21%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RKLS AL AAS ACDHIRDWV GTPEG +VS G Y DGSYNVP G+IYSFPVT RNGEW I QGL ID+ SRKK+DLT EEL EEK L YSC Sbjct: 235 IIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RKLS AL AAS ACDHIRDWV GTPEG WVS G Y DGSYNVP G+IYSFPVT ++GEW I QGL IDE SR+K+D T EL EEKAL YSC Sbjct: 235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RKLS AL AAS ACDHIRDWV GTPEG +VS G Y DGSY+VP G+IYSFPVT RNG+W I QGL IDE SRKK+DLT EEL EEK L YSC Sbjct: 235 IIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.169e-34 Identity = 70/96 (72.92%), Postives = 74/96 (77.08%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RKLS AL AAS ACDHI DWV GTPEG WVS G Y DGSYNVP G+IYSFPVT +NGEW I QGL ID+ SRKK+D T EL EEK L YSC Sbjct: 235 IIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.406e-33 Identity = 70/96 (72.92%), Postives = 74/96 (77.08%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RK S AL AAS ACDHIRDWV GTPEG +VS G Y DGSY VP G+IYSFPVT GEW I QGL IDEFSRKK+D T +ELSEEK L YSC Sbjct: 235 IIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.837e-33 Identity = 69/96 (71.88%), Postives = 74/96 (77.08%), Query Frame = -3 Query: 290 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEKALPYSC 577 IIK RK S AL AAS ACDHIRDWV GTPEG +VS G Y DGSY VP G+IYSFPVT GEW I QGL IDEFSRKK+D T +EL+EEK L YSC Sbjct: 235 IIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAYSC 330
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 52/90 (57.78%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 IIK R S A AA+ A H+RDW GTPE WVS G Y DGSY + G+IYSFP +NG+W I QGLTIDEFSR K+ T EL EE+ Sbjct: 229 IIKARGASSAASAANAAIFHMRDWALGTPENDWVSMGVYSDGSYGIEEGLIYSFPCVCKNGDWEIVQGLTIDEFSRAKMTATENELKEER 318
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.117e-22 Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGS-YNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 +IK RKLS A+ AA CDH+RD FGTPEG +VS G DG+ Y VP ++YSFPVT +N W + +GLTI++FSR+K+DLT +EL+EEK Sbjct: 234 VIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEK 324
BLAST of CF835908 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.459e-22 Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 308 IIKPRKLSRALFAASFACDHIRDWVFGTPEGPWVSKGGYFDGSYNVPGGVIYSFPVTSRNGEWPIFQGLTIDEFSRKKLDLTPEELSEEK 577 II+ R S A AAS A DH+RDW GTPEG WVS DGSY +P G+IY FPV RNG++ I QGL I +FSR+K+D T +EL EE+ Sbjct: 235 IIEARGASSAASAASAAIDHMRDWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEER 324 The following BLAST results are available for this feature:
BLAST of CF835908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835908 ID=CF835908; Name=CF835908; organism=Citrus sinensis; type=EST; length=579bpback to top |