CF836072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 343.969 bits (881), Expect = 5.679e-94 Identity = 175/199 (87.94%), Postives = 191/199 (95.98%), Query Frame = -1 Query: 191 VKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALEG 787 VK S+++HKLNSGP+KENKYVILGEKAKA LVRDSKKDIELIITELQKNPLNYTQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKLG+LDSYEIEG E+K E+LQNL EFQFS V+FNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASIT ELIEIISGASALEG Sbjct: 128 VKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 326
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 3.446e-91 Identity = 168/198 (84.85%), Postives = 188/198 (94.95%), Query Frame = -1 Query: 194 VKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASALE 787 VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDSK DI L +TEL KNPLNY QVSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSE GARMSAMDSSSRNAGEMLDRLTLTYNRTRQASIT ELIEIISGASALE Sbjct: 125 VKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 322
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.869e-30 Identity = 82/185 (44.32%), Postives = 106/185 (57.30%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K +L R + I P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL E S G + E E E IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 114 KTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.199e-29 Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K +L R + I P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL E + G + E E E IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 114 KTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEET--ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.355e-29 Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K K + +G+K +L R + I P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL + + + G G + E E E IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 114 KTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKGA-GSDAAMEFEPSEET--ILETLLPKNLTVQVFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 295
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_DROME (ATP synthase subunit gamma, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-gamma PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.861e-28 Identity = 72/184 (39.13%), Postives = 117/184 (63.59%), Query Frame = -1 Query: 197 DKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 745 + K +G+K++AIL R K+I ++ E+ + P + S +A+++L+ ++ +I+Y++F SVVS+ + + S VE+ KL DS + +++++ EF + ++F + E ACSEQ +RM+AMD++S+NAGEM+D+LTLT+NRTRQA IT ELIEIISGA+AL Sbjct: 124 EANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSE----KLAVYDSLD-------SDVVKSYLEFSLASLIFYTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_PELUB (ATP synthase gamma chain OS=Pelagibacter ubique GN=atpG PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.175e-28 Identity = 81/200 (40.50%), Postives = 114/200 (57.00%), Query Frame = -1 Query: 197 VKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 787 +K +K+ + S K K + +G K L R K I I+ +NY + I++N E FD I Y+KF +V++ +P ++ + E E S D+YE E E EIL NL S +F A+LEN+ SEQG+RMSAMD+++RNAGEM+D+LT+ YNR+RQA+IT ELIEIISGA +L Sbjct: 99 IKKAKTYFQKISDEGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENSSE-----DNYEFEPDED--EILSNLLPKNISTQIFKAMLENSASEQGSRMSAMDNATRNAGEMVDKLTIEYNRSRQAAITKELIEIISGAESL 291
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_METS4 (ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46) GN=atpG PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.987e-27 Identity = 77/183 (42.08%), Postives = 106/183 (57.92%), Query Frame = -1 Query: 197 KYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 733 K + +G+K IL R+ + I +I L + +A ++L E FD + YS+F SV+ +PT + +++ E G+ + D+ YE E E GEIL L + + A+LENA SEQGARMSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 117 KIICVGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIATLFYSRFRSVIVQIPT-----AQQIIPAEIPPAGEAAQTDAAYEYEPDE--GEILAALLPKNLTVQILRALLENAASEQGARMSAMDNATRNAGEMIKKQTLVYNRTRQAQITKELIEIISGAEAL 292
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_JANSC (ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.820e-27 Identity = 76/190 (40.00%), Postives = 109/190 (57.37%), Query Frame = -1 Query: 197 GPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSP--ELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 751 G K K + +G+K + L RD + + L Y + +A D+L E FD I +++F SV+S +PT ++ E VE ++ G L YE ++ +L++L + +F A+LEN SEQGARMSAMD+++RNAG+M+DRLT+ YNR+RQA IT ELIEIISGA AL Sbjct: 111 GEGKTIKILTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEEDEFDVATIFFNRFESVISQIPTATQIIPAVFEDVEEADDTSKDSGTLYEYE----PSEEAVLEDLLPRGIATQIFTALLENGASEQGARMSAMDNATRNAGDMIDRLTIEYNRSRQAVITSELIEIISGAEAL 296
BLAST of CF836072 vs. ExPASy Swiss-Prot
Match: ATPG_PARDP (ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd 1222) GN=atpG PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.334e-26 Identity = 76/185 (41.08%), Postives = 109/185 (58.92%), Query Frame = -1 Query: 197 KENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITPELIEIISGASAL 742 K+ + +G+K + L R+ + + + Y +AD+IL N EFD + Y++F SV+S +PT V+ P ++E G+ G Y+ E E IL +L + +F A+LENA SEQGARM+AMD+++RNAG+M+DRLT YNR+RQA+IT ELIEIISGA AL Sbjct: 114 KQVSILTVGKKGREQLKREYGDLFVNHVDLSEVKRIGYDNARAIADEILDRFDNGEFDVATLFYNRFESVISQVPTARQVI-PAVIEE-----GEAGASSLYDYEPDENA--ILNDLLPRSVATQVFAALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGAEAL 290 The following BLAST results are available for this feature:
BLAST of CF836072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836072 ID=CF836072; Name=CF836072; organism=Citrus sinensis; type=EST; length=787bpback to top |