CF836139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: SGAT_ARATH (Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2) HSP 1 Score: 373.244 bits (957), Expect = 7.256e-103 Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 3 Query: 87 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 MDYMY PG++HLFVPGPV+IP+ VIRAMNRNNEDYRSPA+PALTK LLEDVKKIFKTTSGTPFL PTTGTGAWESALTNTLSPGDRI+SFLIGQFSLLWIDQQ+RLNFNVDVVESDWG+GA L VLASKL+ D HTIKAICIVHNETATGVTN++S VR LLD Y+HPAL LVDGVSSICA+DFRMDEWG+DVALTGSQKALSLP Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSGTPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQGANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSICALDFRMDEWGVDVALTGSQKALSLP 206
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: SGAA_METEA (Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=sgaA PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62 Identity = 115/200 (57.50%), Postives = 145/200 (72.50%), Query Frame = 3 Query: 105 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 PG+NHLFVPGP +IPD+V+RAM +ED+RS P+LTK L ED KK+F +T GT FL P +GTG WESAL+NTL+ GD++++ GQFS LWID QRL +V V E +WG GAK + + L AD H IKA+ +VHNETATGVT+N+ VRK +D HPAL VDGVSSI ++ F+ DEW +D A+ GSQK L LP Sbjct: 7 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFPASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKIEEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFVDGVSSIGSLPFKADEWKVDCAIAGSQKGLMLP 206
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: SGAA_HYPME (Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 8.692e-56 Identity = 102/196 (52.04%), Postives = 135/196 (68.88%), Query Frame = 3 Query: 117 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 HLF+PGP +IPD V AMN ED RSP P T L ED+KK FK G F+ P++GTGAWESA+ NTL+ GD+++ GQFSLLW+D +RL V+V + +WG G ++ A LA D H IKA+ + HNETATGV+++++ VRK LD +HPAL +VDGVSS+ ++D RM EWG+D ++GSQK LP Sbjct: 6 HLFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTGAWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILAKDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSVGSLDMRMGEWGVDCCVSGSQKGFMLP 201
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: DHSS_ANACY (Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.667e-28 Identity = 67/195 (34.36%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 120 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 L +PGP +P+ + A+ ++ +R+ + + +++K + +T S ++ +GTGA E+ + N LSPGDRI+ G+F W++ Q NV+ + ++WG+ D A KL ADT IKA+ I H+ET+TGV N+L + + E+ AL +VD V+S+ A + +D G+DV +GSQK +P Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDV-LMLNVSGTGAVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQADTNKEIKAVIITHSETSTGVINDLVAINSHVKEHGQ-ALIIVDAVTSLGAYNVPVDALGLDVVASGSQKGYMIP 199
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: Y959_METJA (Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 64/198 (32.32%), Postives = 113/198 (57.07%), Query Frame = 3 Query: 111 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 K L +PGP +P +V+ AM +R+ L + +E +KK+F T + T FLI +GT A + A++N + GD++++ + G F + + + ++ +WG+ A+ + A K D IKA+ +VHNET+TG N + ++ +++ +Y AL++VD VSS+ +D++ ID+ +TGSQK L+ P Sbjct: 7 KKLLMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVFITENDT-FLITGSGTAAMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPE--AVKEILDKYDDIKAVTVVHNETSTGARNPIKEIGEVVKDY--DALYIVDTVSSLGGDYVNVDKFHIDICVTGSQKCLAAP 199
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: DHSS_SYNP1 (Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 57/198 (28.79%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 111 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 K L +PGP +P+ V+ ++ ++ +RS + + +K + +T + ++ +GTGA E+ + N LS GDR++ G+F W + + + + WG+ D + L KA+ + H+ET+TGV N+L + + + + AL +VD V+S+ A+ +DEWG+DV +GSQK +P Sbjct: 4 KAMLMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEV-LILAASGTGAMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLDGHRQKPSKAVIVTHSETSTGVINDLEAINRHVKAHGQ-ALIIVDAVTSLGAVSVPIDEWGLDVVGSGSQKGYMIP 199
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: AGX1_YEAST (Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 57/202 (28.22%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 120 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGT---PFLIPTTGTGAWESALTNTL---SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 L +PGP+ + V +A++ + + SP ++ + +L++ + +FK+ + + PF++ +GT W+ +N + +P ++ G FS + D + VDVV GE L+++ KL+ ++ A+ + H +T+T V ++L + + + + F+VD V SI +F DEWG+D ALT SQKA+ P Sbjct: 8 LLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS---YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAP 206
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: PUCG_BACSU (Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18 Identity = 54/195 (27.69%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 120 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 + PGPV + +V+R M+ PA + +E ++++F+T + + I T E+ L + + P D ++ + G+F L + +R NV ++E +WG + + ++ K + +VH ET+TG + L + + ALF+VD V++I + ++DEW ID A+ G+QK LS+P Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKP---KIVAMVHGETSTGRIHPLKAIGEAC--RTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVP 203
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: SPYA_DICDI (Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 54/195 (27.69%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 120 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 L PGP ++ +V + + + Y + + +E ++ +F+T + I GT A E+ ++N + PGD+++ + G FS R N+ V+ WG+ L+ + S L H + +V ET+TGV + V +L +Y L +VD V+++ + +D+W ID TG+QK LS P Sbjct: 21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTAAMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESAL---VQHKPSLLTLVFGETSTGVKQQMEGVGELCKKYN--CLLMVDCVAALGGVPVFVDDWKIDACYTGTQKCLSGP 210
BLAST of CF836139 vs. ExPASy Swiss-Prot
Match: SPYA_HUMAN (Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 61/199 (30.65%), Postives = 95/199 (47.74%), Query Frame = 3 Query: 120 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKILLEDVKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW----IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP 704 L PGP ++P +++ A S + + + E ++ +F+T + +I +G A E+AL N L PGD SFL+G + W +D +R+ V + D G L + LA H + + H E++TGV L +L Y+ L LVD V+S+ MD GID+ +GSQKAL+ P Sbjct: 25 LLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGD---SFLVGANGI-WGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQ---HKPVLLFLTHGESSTGVLQPLDGFGELCHRYK--CLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAP 214 The following BLAST results are available for this feature:
BLAST of CF836139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836139 ID=CF836139; Name=CF836139; organism=Citrus sinensis; type=EST; length=706bpback to top |