CF836186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.810e-55 Identity = 116/169 (68.64%), Postives = 123/169 (72.78%), Query Frame = -1 Query: 305 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGD-QWPSQIADGGWAGGEVQKPIPGVPYF-----PEAPAATVPLGGD 793 QTSF+EPRLLI TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR A+DYA ++N + D QWP I D W+ V +PIP VP EAPAA GGD Sbjct: 120 QTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQWPGTI-DQSWSDA-VPQPIPAVPGVNWGAPAEAPAAA---GGD 283
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.213e-53 Identity = 108/149 (72.48%), Postives = 115/149 (77.18%), Query Frame = -1 Query: 350 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTN-LTSGDQWPSQIADGGWAGGEVQKPIPGVP 793 QTSF+EPRLLI TDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYR A DYA A++N + + S QWP+ I D W V +PIP VP Sbjct: 116 QTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDGQWPAAI-DQPW-NDAVPQPIPAVP 262
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.447e-52 Identity = 117/209 (55.98%), Postives = 125/209 (59.81%), Query Frame = -1 Query: 197 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAI-DYATAEYNTNL---TSGDQWPSQIADGGWAGGEVQ--KPIPGVP---YFPEAP-AATVPLGGDGWXXXXXXXXXXXXXXXXXXXXXXXVSAAPPPTGWD 793 QTSF+EPRLLI TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI PGHKWDVMVDLFFYR A DY +Y G W + I D G +V PIP VP + AP + VP+ DGW V PPP GW+ Sbjct: 113 QTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGDWGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGW---------DAAAAPPVAVPPPVVEGVPPPAGWE 312
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.174e-52 Identity = 106/165 (64.24%), Postives = 111/165 (67.27%), Query Frame = -1 Query: 299 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAPAATVPLGGDGW 793 QTSF+EPRLLI TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I GHKW+VMVDLFFYR DY + DQW + I D W G VQ VP A P+ GDGW Sbjct: 113 QTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADYAAAPIGGADQW-NAIPDAQWGGDVVQPANSAVPAGTWTDAG--PIAGDGW 274
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.532e-49 Identity = 105/168 (62.50%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 308 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQW-PSQIADGGWAGGEVQKPIP-----GVPYFPEAPAATVPLGG 793 QTSF+EPRLLI TDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI KWDVMVDLFFYR + A + + + GDQW +QI+D W+ GEV++PI GV AA+VP G Sbjct: 118 QTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGD------EEAEVQADYGMVGGDQWTTAQISDAAWS-GEVEQPISAAPAVGVTVAAGWEAASVPAAG 278
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 1.257e-48 Identity = 107/173 (61.85%), Postives = 113/173 (65.32%), Query Frame = -1 Query: 299 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNT------NLTSGDQW-PSQIADGGWAGGEVQKPIPGVPYFPE-APAATVPLGGDGW 793 QTSF+EPRLLI TDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI G KWDVMVDLFFYR AEY + GDQW +QI D W GE Q PI P + +A P G GW Sbjct: 117 QTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAG----PQAEYGALPAPEYGMVGGDQWTTAQIPDAAWP-GEGQAPISAAPAAASWSDSAAAPADG-GW 283
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.799e-48 Identity = 103/168 (61.31%), Postives = 108/168 (64.29%), Query Frame = -1 Query: 302 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR---XXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQW-PSQIADGGWAGGEVQKPIPGVPYFPEAPAATVPLGGDG 793 QTSF+EPRLLI TDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP KWDVMVDLFFYR EY GDQW + I D W GE Q PI P + P +G Sbjct: 114 QTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYREPEETKPEDEDEVAPQAEFGLPAPEYG----GGDQWTTAAIPDAAWP-GEAQAPISAAPAAGSWNDSAAPAAAEG 276
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_OSTTA (40S ribosomal protein SA OS=Ostreococcus tauri GN=Ot03g03270 PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 69/90 (76.67%), Postives = 76/90 (84.44%), Query Frame = -1 Query: 515 FNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 784 F EPR+L+ TDPRTD QPI E A NIPTIAFCDTDSP++ VDI IPANNK K SIGCL++LLARMVLQMRGTI P + WDVMVDLFFYR Sbjct: 113 FAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYR 202
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_OSTLU (40S ribosomal protein SA OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.301e-34 Identity = 90/196 (45.92%), Postives = 104/196 (53.06%), Query Frame = -1 Query: 197 FNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYNTNLTSGDQWPSQIADGGWAGGEVQKPIPGVPYFPEAPAATVPLGGDGWXXXXXXXXXXXXXXXXXXXXXXXVSAAPPPTGWD 784 F EPR+LI TDPRTD QPI E A N+PTIAFCDTDSP++ VD+ IPANNK KHSIGCL++LLARMVLQMRGT+ + WDVMVDLFFYR + A A ++G + A G + E QKP P APAA W S AP PTGWD Sbjct: 113 FAEPRVLIVTDPRTDAQPISETAYVNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQMRGTVSAANPWDVMVDLFFYRDPEELEAKEE------EAAAAAAAPAESAGYNAVADAAYGAESWDE-QKPAEAFPTGGFAPAA------GNW------------------------SEAPAPTGWD 271
BLAST of CF836186 vs. ExPASy Swiss-Prot
Match: RSSA_CHLRE (40S ribosomal protein SA OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.339e-33 Identity = 66/93 (70.97%), Postives = 77/93 (82.80%), Query Frame = -1 Query: 515 QTSFNEPRLLIXTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 793 Q +F EPRLLI TDPRTDHQP+KE++ NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR I + W V VDLFFYR Sbjct: 108 QKAFEEPRLLILTDPRTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRDQINVTNPWSVPVDLFFYR 200 The following BLAST results are available for this feature:
BLAST of CF836186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836186 ID=CF836186; Name=CF836186; organism=Citrus sinensis; type=EST; length=793bpback to top |