CF836417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: ST7R_ARATH (7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.423e-52 Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 +APSKIVASYTT+SGETK SLLLTSGWWGLARHFHYVPEIL+AFFWTVPALF++FL YFYVIFLT+LLFDRAKRDDDRCRSKYGKYWK+YC+KV YRIIPGIY Sbjct: 330 RAPSKIVASYTTTSGETKTSLLLTSGWWGLARHFHYVPEILSAFFWTVPALFDNFLAYFYVIFLTLLLFDRAKRDDDRCRSKYGKYWKLYCEKVKYRIIPGIY 432
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_XENTR (7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 K P I SYT++ G+ S L+ SG+WG+ARH +Y +++ + + + F+H LPYFY ++TILL R RD+ RC SKYGK WK+Y VPYR++PG++ Sbjct: 371 KKPKSIECSYTSADGKRHYSKLMISGFWGVARHLNYTGDLMGSLAYCLACGFDHLLPYFYFTYMTILLVHRCIRDEHRCSSKYGKDWKLYTDAVPYRLLPGLF 473
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_MIMIV (Probable 7-dehydrocholesterol reductase OS=Acanthamoeba polyphaga mimivirus GN=DHCR7 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24 Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = -3 Query: 492 IVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 785 I +Y T+ G + S L+ SG WG++RH +Y +I+ + + + F+HF+PYFY +++TILL R RD+ RC KYGKYWK+Y ++VPYR IPGIY Sbjct: 350 IPCTYQTADGLNRASKLIYSGLWGVSRHMNYTGDIILSTAYCLACGFSHFIPYFYCVYMTILLVTRCLRDEQRCSRKYGKYWKMYTKRVPYRFIPGIY 447
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: LBR_MOUSE (Lamin-B receptor OS=Mus musculus GN=Lbr PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.364e-24 Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = -3 Query: 492 TSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 767 TS+G++ LL SGWWG RH +Y+ +++ A W++P FNH LPYFY+I+ T LL R RD+ +CR KYG W+ YCQ+VPYRI P IY Sbjct: 539 TSTGKS----LLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHLLPYFYIIYFTALLIHREARDEHQCRRKYGLAWEKYCQRVPYRIFPYIY 626
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: LBR_RAT (Lamin-B receptor OS=Rattus norvegicus GN=Lbr PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.086e-23 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = -3 Query: 492 LLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 737 LL SGWWG RH +Y+ +++ A W++P FNH LPYFYVI+ T LL R RD+ +CR KYG W+ YCQ+VPYRI P IY Sbjct: 539 LLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHILPYFYVIYFTALLIHREARDEHQCRRKYGLAWEKYCQRVPYRIFPYIY 620
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_XENLA (7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.852e-23 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 K P I Y ++ G+ S L+ SG+WG+ARH +Y +++ + + + F+H LPYFY I++TILL R RD+ RC SKYGK WK+Y VPYR++PG++ Sbjct: 371 KKPKSIECFYVSADGKRHYSKLMISGFWGVARHLNYTGDLMGSLAYCLACGFDHLLPYFYFIYMTILLVHRCIRDEHRCSSKYGKDWKLYTSAVPYRLLPGLF 473
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: LBR_HUMAN (Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23 Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = -3 Query: 492 TSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 767 TS+G+ LL SGWWG RH +Y+ +++ A W++P FNH LPYFY+I+ T+LL R RD+ C+ KYG W+ YCQ+VPYRI P IY Sbjct: 528 TSTGKN----LLVSGWWGFVRHPNYLGDLIMALAWSLPCGFNHILPYFYIIYFTMLLVHREARDEYHCKKKYGVAWEKYCQRVPYRIFPYIY 615
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_HUMAN (7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 + P I SYT++ G+ S LL SG+WG+ARHF+YV +++ + + + H LPYFY+I++ ILL R RD+ RC SKYG+ W+ Y VPYR++PGI+ Sbjct: 373 RKPKVIECSYTSADGQRHHSKLLVSGFWGVARHFNYVGDLMGSLAYCLACGGGHLLPYFYIIYMAILLTHRCLRDEHRCASKYGRDWERYTAAVPYRLLPGIF 475
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_RAT (7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.125e-23 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 K P I SYT++ G +S LL SG+WG+ARHF+Y +++ + + + H LPYFY+I++TILL R RD+ RC +KYG+ W+ Y VPYR++PGI+ Sbjct: 369 KKPKAIECSYTSADGLKHRSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYFYIIYMTILLTHRCLRDEHRCANKYGRDWERYVAAVPYRLLPGIF 471
BLAST of CF836417 vs. ExPASy Swiss-Prot
Match: DHCR7_MOUSE (7-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr7 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.388e-23 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = -3 Query: 492 KAPSKIVASYTTSSGETKQSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKIYCQKVPYRIIPGIY 800 K P I SYT++ G S LL SG+WG+ARHF+Y +++ + + + H LPYFY+I++TILL R RD+ RC +KYG+ W+ Y VPYR++PGI+ Sbjct: 369 KKPKAIECSYTSADGLKHHSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYFYIIYMTILLTHRCLRDEHRCANKYGRDWERYTAAVPYRLLPGIF 471 The following BLAST results are available for this feature:
BLAST of CF836417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836417 ID=CF836417; Name=CF836417; organism=Citrus sinensis; type=EST; length=802bpback to top |