CF836454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23 Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 +EEEDI GFVL+S P+ +VT+F+AQ+ I+EL +I AG+ V+H+H +EE IV+LLH+++ K G V+ ++ +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 558 VEEEDISPGFVLTSPKNPIKSVTKFVAQIAIVEL--KSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 6.505e-23 Identity = 50/128 (39.06%), Postives = 80/128 (62.50%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 +EEED+ G+VL+S KP+ +T F AQ+ I+EL +I + G+ V+H+H +EE +EL H+++ K G V+ ++ N S+C E +AD+ QLGRFTLR +G T+A+GK+T++ Sbjct: 575 VEEEDLAPGYVLTSPLKPIKTITRFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.110e-22 Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 +EEE+I +GFVL+S PV VT F+AQ+ I+EL +I +AG+ V+HIH +EE + LLH+++ K G ++ I+ N +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 572 VEEEEISAGFVLTSPKNPVKNVTRFVAQIAIVEL--KSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.216e-22 Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 IEEED+ +G+VLSS+ PV VT F AQ+ I+EL +I + G+ V+H+H +EE +LLH + K G ++ ++ +C E + D+ QLGRFTLR +G+T+A+GKVT+L Sbjct: 615 IEEEDLSAGYVLSSINHPVKTVTRFEAQIAIVEL--KSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKVTKL 740
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.507e-22 Identity = 49/128 (38.28%), Postives = 78/128 (60.94%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 +EEEDI GFVL+S PV VT F+AQ+ I+EL +I ++G+ V+H+H +EE I +LLH+++ K G ++ ++ +C E + D+ QLGRFTLR +G T+A+GK+ ++ Sbjct: 535 VEEEDIAPGFVLTSPKNPVKNVTRFVAQVAIVEL--KSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 660
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22 Identity = 50/128 (39.06%), Postives = 80/128 (62.50%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 +EEED+ G+VL+S PV VT+F AQ+ I+EL +I + G+ V+H+H +EE + VEL H+++ K G ++ ++V+ +C E + D+ QLGRFTLR +G T+A+GK+T+L Sbjct: 586 VEEEDLQPGYVLTSPKNPVKTVTKFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKITKL 711
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.602e-21 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 IEEED+ G+VL+S PV VT F AQ+ I+EL +I + G+ V+H+H +EE + +EL H+++ K G ++ ++V +C E + D+ QLGRFTLR +G T+A+GK+T+L Sbjct: 589 IEEEDLQPGYVLTSPKNPVKTVTRFEAQIAIVEL--KSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKITKL 714
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.952e-21 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 378 EEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 758 ++ D+ +G+VL+S PV A T FIAQ+ ILEL +I T GY V+HIH VEE +LLH++D G ++ ++ +C E+F D+ +GRFTLR +G TVAVGKV ++ Sbjct: 537 DDSDVQTGYVLTSTKNPVHATTRFIAQIAILEL--PSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKSKKPPMFAT-KGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.363e-19 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 IEEE+IL GF+L + + F AQ+ I+E +I GY AVLHIH +EE EI L+ +D K + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 369 IEEEEILPGFILCDLNNLCHSGRTFDAQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 494
BLAST of CF836454 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.443e-19 Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = -1 Query: 378 IEEEDILSGFVLSSVAKPVAAVTEFIAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLHQIDXXXXXXXXXXXXXXKNGAIVVCRIQVNNSICTEKFADFAQLGRFTLRTEGKTVAVGKVTEL 761 IEEE+IL GF+L + + F Q+ I+E +I GY AVLHIH +EE EI L+ +D K + + R++ +IC E F DF Q+GRFTLR EGKT+A+GKV +L Sbjct: 498 IEEEEILPGFILCDPSNLCHSGRTFDVQIVIIE--HKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 623 The following BLAST results are available for this feature:
BLAST of CF836454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836454 ID=CF836454; Name=CF836454; organism=Citrus sinensis; type=EST; length=761bpback to top |