CF838307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838307 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.822e-69 Identity = 133/208 (63.94%), Postives = 149/208 (71.63%), Query Frame = 1 Query: 214 MALLLSTTANITTSPRKTLPFLATGTPKRQITVKSLQKRSKNL-SPLRVXXXXXXXXXXXEETMRKDEKEDYGSLVDDEYG--KESSDSKFSWRDHWYPVSLVEDLDPNLPTPFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLF 828 + LL ST+A IT S K +PFL+ T K + V RSK +PLRV E R +++EYG KE S+F WRDHWYPVSLVEDLDPN+PTPFQLLGRDLVLWFD N KW AFDD CPHRLAPLSEGR+DENGHLQCSYHGWSF GCGSCTRIPQAA+ GPEARA++SPRACA +FPTMVSQGLLF Sbjct: 3 VVLLSSTSATITKSQSKKIPFLSP-TTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDSTEEKR----------IEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLF 199
BLAST of CF838307 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 484 RDHWYPVSLVEDLDPNLPTPFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIP 732 R+ WYP + L+P + PF L G VL+ D +S D C HR PLS G++ NGH+QC YHGW FDG G+CT++P Sbjct: 131 RNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAP-TCIKDSCAHRACPLSLGKVI-NGHVQCPYHGWEFDGSGACTKMP 211
BLAST of CF838307 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 451 GKESS-DSKFSWRDHWYPVSLVEDLDPNLPTPFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIP 732 G ESS + + R+ WYP L + PF+L G V++ D D+C HR PLS G++ E G + C YHGW F+G G+CT++P Sbjct: 290 GLESSMEIEEGLRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQP-SCIRDECAHRGCPLSLGKVVE-GQVMCPYHGWEFNGDGACTKMP 382 The following BLAST results are available for this feature:
BLAST of CF838307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838307 ID=CF838307; Name=CF838307; organism=Citrus sinensis; type=EST; length=829bpback to top |