CF838480
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 65/160 (40.62%), Postives = 78/160 (48.75%), Query Frame = 3 Query: 3 KRRGIKN-YRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDSTTVATAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGDQIQSDFWEMIGED-EIQQWMT---MMDFGT-DSSDSANT 464 KR+ KN YRGVRQRPWGK+AAEIRDP+RATRVWLGTF T FRGPRAKLNFPF D T+ ++ D ++++ W G D +++WM MMDFG DSSDS NT Sbjct: 128 KRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSS-------------------------PVAADDIGAKASASASVSATDSVEAEQWNGGGGDCNMEEWMNMMMMMDFGNGDSSDSGNT 262
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16 Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 K YRGVRQRPWGKWAAEIRDP +ATRVWLGTF T FRG +AKLNFP Sbjct: 59 KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16 Identity = 38/59 (64.41%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 +NYRGVRQRPWGKWAAEIRDP +A RVWLGTF+T FRG +AKLNFP Sbjct: 68 RNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15 Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 3 KRRGIKN-YRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 KRR KN YRG+R+RPWGKWAAEIRDPR+ RVWLGTFNT RG +AKLNFP Sbjct: 71 KRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15 Identity = 38/59 (64.41%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 + YRGVRQRPWGKWAAEIRDP RA RVWLGTF+T FRG +AKLNFP Sbjct: 75 RRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 ++YRGVRQRPWGKWAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 88 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 ++YRGVRQRPWGKWAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 37 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 194 ++YRGVRQRPWGKWAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 90 RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 3 Query: 3 KRRGIKNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDST 209 KR+ +RG+RQRPWGKWAAEIRDPR+ RVWLGTFN+ RG +AK+NFP +T Sbjct: 113 KRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTT 181
BLAST of CF838480 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 37/64 (57.81%), Postives = 41/64 (64.06%), Query Frame = 3 Query: 18 KNYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDST 209 + +RGVRQRPWGKWAAEIRDP R RVWLGTF+T RGP A+LNFP P T Sbjct: 85 RKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVT 148 The following BLAST results are available for this feature:
BLAST of CF838480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838480 ID=CF838480; Name=CF838480; organism=Citrus sinensis; type=EST; length=772bpback to top |