CF838484

Overview
NameCF838484
Unique NameCF838484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6087 contig Csv1_Contig6087:25..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF838484 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.740e-19
Identity = 75/281 (26.69%), Postives = 135/281 (48.04%), Query Frame = 2
Query:   14 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLE--EQIRLVSIPDGM--EPWEDRNDFGKLIENFLQVMPGKLEKLIEEINSRED-EKIDCFIADGNMGWSLEVAKKMNVRGAVFWSSSAALVALVFCIPKLIDDGII----DSHGTPMSMQ--MFRIAPKMPEMNSRDC-FWAHIGDLTTQKIFFDL--LERNRRAMMAVNFHFCNSTYELESEAFTMFPELLPIGPL-IASNRQ-------GNSAGYFWREDSNCLKW 790
            PHV+ +P PAQGH+ P++  ++ L   GF VTFVNT Y H R + S +G N L+     R  SI DG+     +   D   L E+ ++       +L++ IN+ ++   + C ++DG M ++L+VA+++ V   +FW++S             I+ G+     +S+ T   ++  +    P M  +  +D   +    +     I F L   ER +RA   +   F +  +++     ++ P +  +GPL + +NR+       G  +   W+E+  CL W
Sbjct:   12 PHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQSILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDW 291          
BLAST of CF838484 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 70/291 (24.05%), Postives = 124/291 (42.61%), Query Frame = 2
Query:   14 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE-----SLQGKNYLEEQIRLVSIPDGMEPWEDRNDFGKLIE----NFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMNVRGAVFWSSSAALVALVFCIPKLIDDGII-----------DSHGTPMSMQMFRIAPKMPEMNSRDCFWAHIGDLTTQKIFFDLLERNRRAMMAVNFHFCNSTYELESEAF----TMFPELLPIGPL--IASNRQGNSAGY------FWREDSNCLKW 790
            PHV+++P P QGHV PL++ ++ L   G RVTFV T Y ++R++      +++       + R+  I DG+     +ND G L++    N L      L +L +E+  ++   + C + D  M ++   A++  +    F+++SA  +       +L++ G++           D   TP+        P M  M  RD             +      +   +         N+ YELE +        FP +  +GPL  + ++    SAG        W+ED+ CL W
Sbjct:   11 PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLSLSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEW-----VPGMSHMRLRD-MPTFCRTTDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVDALAAFFPPIYTVGPLAEVIASSDSASAGLAAMDISIWQEDTRCLSW 295          
The following BLAST results are available for this feature:
BLAST of CF838484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH1.740e-1926.69Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI1.801e-1624.05Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06L13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838484 ID=CF838484; Name=CF838484; organism=Citrus sinensis; type=EST; length=833bp
GGAAATGAGCCCCCCACACGTTTTGGTGATGCCTGGTCCAGCACAAGGCC
ATGTAATTCCTTTACTGGAGTTTTCACAATGTCTGGCAAAACATGGCTTC
CGAGTCACATTCGTTAATACGGATTATTATCACAAGCGGGTAGTGGAATC
ATTGCAGGGAAAGAATTATCTAGAGGAGCAAATCCGTTTGGTTTCGATCC
CAGATGGGATGGAACCCTGGGAAGATAGAAACGATTTCGGAAAGCTAATT
GAAAATTTTTTACAGGTTATGCCGGGGAAGCTGGAGAAGCTCATAGAAGA
GATCAACAGTAGAGAAGATGAAAAAATTGATTGTTTCATTGCAGATGGGA
ACATGGGTTGGTCTTTGGAGGTAGCAAAAAAGATGAACGTCAGGGGGGCT
GTCTTTTGGTCTTCATCAGCAGCATTAGTGGCATTGGTATTTTGTATCCC
CAAACTTATTGATGATGGAATCATTGACAGTCACGGAACTCCTATGAGCA
TGCAGATGTTTCGAATTGCACCAAAGATGCCTGAAATGAACTCTAGAGAC
TGTTTTTGGGCACATATTGGTGACTTGACCACGCAAAAGATTTTTTTTGA
TTTACTGGAAAGAAACAGGAGAGCAATGATGGCGGTAAATTTCCACTTTT
GTAACTCAACATATGAGCTCGAGTCTGAAGCATTCACCATGTTTCCGGAA
CTTCTGCCAATAGGACCACTTATAGCAAGCAACCGCCAAGGGAATTCAGC
AGGATACTTCTGGCGCGAAGATTCAAACTGTTTGAAATGGGCTAAACCAA
CAGCCACCCAGCTCTGTCATTTATGCTGCTTTT
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