CF838823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.394e-17 Identity = 58/152 (38.16%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDSTTVATAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGDQIQSDFWEMIGED-EIQQWMT---MMDFGT-DSSDSANT 462 +RGVRQRPW +AAEIRDP+RATRVWLGTF T FRGPRAKLNFPF D T+ ++ D ++++ W G D +++WM MMDFG DSSDS NT Sbjct: 136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSS-------------------------PVAADDIGAKASASASVSATDSVEAEQWNGGGGDCNMEEWMNMMMMMDFGNGDSSDSGNT 262
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13 Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 16 EEFRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +++RGVRQRPW WAAEIRDP +ATRVWLGTF T FRG +AKLNFP Sbjct: 59 KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13 Identity = 37/66 (56.06%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 10 ALEEFRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDST 207 A +FRGVRQRPW WAAEIRDP R RVWLGTF+T RGP A+LNFP P T Sbjct: 83 ATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVT 148
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.578e-13 Identity = 35/57 (61.40%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +RGVRQRPW WAAEIRDP RA RVWLGTF+T FRG +AKLNFP Sbjct: 77 YRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13 Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 1 ERGALEEFRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFPDST 207 +R +FRG+RQRPW WAAEIRDPR+ RVWLGTFN+ RG +AK+NFP +T Sbjct: 113 KRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTT 181
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13 Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +RGVRQRPW WAAEIRDP +A RVWLGTF+T FRG +AKLNFP Sbjct: 70 YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12 Identity = 37/65 (56.92%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFPFP-DSTTV 213 FRGVR+RPW +AAEIRDP + TRVWLGTF+T FRG +AK NFP P +STTV Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTV 97
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +RGVRQRPW WAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 90 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +RGVRQRPW WAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95
BLAST of CF838823 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 22 FRGVRQRPWA*WAAEIRDPRRATRVWLGTFNTXXXXXXXXXXXXXXFRGPRAKLNFP 192 +RGVRQRPW WAAEIRDP++A RVWLGTF T F+G +AKLNFP Sbjct: 92 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148 The following BLAST results are available for this feature:
BLAST of CF838823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838823 ID=CF838823; Name=CF838823; organism=Citrus sinensis; type=EST; length=760bpback to top |