CF838842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 3.130e-73 Identity = 146/205 (71.22%), Postives = 161/205 (78.54%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQS-GSVE----ERDRQPKPSEEAD-YSSSANEGNWRTS--XXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 D FPA LRVLVVDDDPTCL ILE+ML TCLY VTKCNRAE AL +LR NKNG+DIVIS+VHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVRIEALKNIWQHVVRK++NEW E S GS+E +RDRQ + E+AD SSS NEGN R+S +S+LKKPRV+WSVELH Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELH 226
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 269.626 bits (688), Expect = 1.315e-71 Identity = 145/217 (66.82%), Postives = 163/217 (75.12%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEER-DRQPKP------------SEEA--DYSSSANEG-NWRTS----XXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 + FP+GLRVLVVDDDPTCL ILE+MLRTCLYEVTKCNRAE+AL +LR NK+G+DIVIS+VHMPDMDGFKLLE VGLEMDLPVIMMSADDSK VV+KGVTHGA DYLIKPVR+EALKNIWQHVVRKR++EW E SGS+EE +RQ + E+A D SSS NEG NWR+S S LKKPRV+WSVELH Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELH 247
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.785e-52 Identity = 109/200 (54.50%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEERDRQPKPSEEADYSSSANEGNW---RTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 DQFP G+RVL VDDD TCL+ILE +LR C Y VT N+A+ AL++LR NKN +D+VIS+V MPDMDGFKLLE VGLEMDLPVIM+SA + VMKGVTHGACDYL+KPVRIE LKNIWQHVVR R + + GS D++ E +S N G R + KK RV+W+VELH Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFD-----KNRGSNNNGDKRDGSGNEGVGNSDPNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELH 205
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.785e-52 Identity = 109/201 (54.23%), Postives = 136/201 (67.66%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRK---RKNEWKDLEQSGSVEERDRQPKPS-EEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 DQFP G+RVL VDDD TCLRIL+ +L+ C Y VT N+A+ AL++LR NKN +D+VIS+V MPDMDGFKLLE VGLEMDLPVIM+SA + VMKGV HGACDYL+KPVRIE LKNIWQHVVRK +KN+ SG+ ++ +R+ K EE + N+ + T+ KKPRV+W+ ELH Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQ------------------KKPRVLWTHELH 193
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.723e-50 Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 2 Query: 191 PAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEERDRQPKPSEEADYSSSANE---GNWRTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 P GLRVLVVDDDPT L+ILEKML+ C YEVT C A AL +LR K+GYDIVIS+V+MPDMDGFKLLE VGLE+DLPVIMMS D VMKGV HGACDYL+KP+R++ LK IWQHV+RK+ E +D+E G D + +EA + + G R +S+ KK RV+WS ELH Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITR-YDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELH 203
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 9.489e-46 Identity = 100/208 (48.08%), Postives = 132/208 (63.46%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGL-EMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEERDRQ----------PKPSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 DQFP+GLR+LVVDDD +CL ILEKML +Y+VT C++A++AL +LR K+ +D+V+S+VHMP M+G+ LL+QVGL EMDLPVIMMS D VM G+ HGACDYLIKP+R E LKNIWQHVVR++ K+L S ++E+ + SEE+ + + S S KK RV+WS+ELH Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNS--KKSRVVWSIELH 210
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.709e-45 Identity = 100/202 (49.50%), Postives = 126/202 (62.38%), Query Frame = 2 Query: 182 DQFPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDL---EQSGSV--EERDRQPKPSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 D+FP G+RVL VDD+PTCLR LE++L C Y VTK + AL+MLR N N +D+VIS+V MPD DGFKLLE +GLEMDLPVIM+SA VMKG+ HGACDYL+KPV ++ L+NIW HVV+K + L +S SV R R+ K ++ D S E + + T KKPRV+WS ELH Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREED--------DGEGSEQDGDGSGTRKKPRVVWSQELH 204
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: APRR4_ARATH (Putative two-component response regulator-like APRR4 OS=Arabidopsis thaliana GN=APRR4 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 2 Query: 188 FPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKN---------EWKDLEQSGSV-EERDRQPKPSEEAD-YSSSANEGNWRTSXXXXXXXXXXXXXXXTSTLKKPRVIWSVELH 772 FP GLRVLV D+DP+ L ILE+ L+ Y+VT CN A+ LR ++N +D+ + +V+ + D F+ L ++G EMDLP+I++S DDS + V K + +GA DYLIKP+R E L+ +++H+V+K + E E+S SV + R P S+ + + NE + S+ KK RV+W ELH Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEED----------RHDHNDRACASSAKKRRVVWDEELH 233
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25 Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 2 Query: 188 FPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEERDRQPK-----PSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTS--TLKKPRVIWSVELH 772 +P GLRVLV+DDD + L ++E +L C Y+VT A+ + N D+VIS+ P DG +L++V + +P ++M++ VMK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P + A S+A E + T L K R+ W+ +LH Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 208
BLAST of CF838842 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25 Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 2 Query: 188 FPAGLRVLVVDDDPTCLRILEKMLRTCLYEVTKCNRAEIALDMLRTNKNGYDIVISEVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEERDRQPK-----PSEEADYSSSANEGNWRTSXXXXXXXXXXXXXXXTS--TLKKPRVIWSVELH 772 +P GLRVLV+DDD + L ++E +L C Y+VT A+ + N D+VIS+ P DG +L++V + +P ++M++ VMK V +GA D+L+KPVRIE L NIWQH+ RK+ + K+ G++E+ P + A S+A E + T L K R+ W+ +LH Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLH 208 The following BLAST results are available for this feature:
BLAST of CF838842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838842 ID=CF838842; Name=CF838842; organism=Citrus sinensis; type=EST; length=774bpback to top |