CF838901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 4.818e-40 Identity = 83/170 (48.82%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 656 YHSS +D + TK G LLPL+S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P S++E E+ R YL+Q+R+ET RL + P + P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 6.293e-40 Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 656 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 6.293e-40 Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRP-NGTPNKWWLAFAKRKFMN 656 YHSS +D + TK G LLP++S KGPAP +D TDIVDEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+ LK+L+ + ++G K + LG+ P+PGEP FP ++A P +++E E+ R YL+Q+R+ET RL + P N P+KWW F KR+FMN Sbjct: 4 YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe GN=arc3 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.368e-33 Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACGCPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 656 YHSSF+ V +LPLK+ +GPA +D+ + DI+DE I FRAN FFRNF+IK AD+ LIY T +I+ L R+ G + + + +L LE +PG FP L+A P S ++AE+ R YL Q R+E + RLLS Y P+KWW F+KR+FMN Sbjct: 4 YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNG-LNYRDAERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMN 171
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_DICDI (Actin-related protein 2/3 complex subunit 3 OS=Dictyostelium discoideum GN=arcC PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.705e-33 Identity = 72/172 (41.86%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 147 MVYHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAYRPN-GTPNKWWLAFAKRKFMN 656 MVYHS F DE + G P+LPLK+ KGPAP D + DI+DEA+ F+AN+ FRNF+++ + D++LIYLT YI L ++ A+ KA+ + E+ +PGE FP GL +P ++ A+ R Y Q+R E RL Y + NKWW+ F+KRKF+N Sbjct: 1 MVYHSQFNDESAGFRLVGNVPILPLKTTHKGPAPKGDANSVDIIDEALDLFKANILFRNFEVQGNGDRVLIYLTLYITKCLLKI-APMNKADAEKALFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTLRQYFTQLRLELGVRLCQRVYAVDPSKANKWWICFSKRKFLN 171
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_CAEEL (Probable actin-related protein 2/3 complex subunit 3 OS=Caenorhabditis elegans GN=arx-5 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.731e-33 Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACGCPL--LPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEK-VPVPGEPNFPFPGLFALPQSQKEAELFRNYLKQIREETSGRLLSVAY-RPNGTPNKWWLAFAKRKFMN 656 YHS F E V + LP++++ KGPAP ++QD DI+DEA+T+F+ N+FFR F+IK AD+ +IYL FYI L++L+ G K + L L +P+PGE FP ++ PQS+ + + R YL+QIR+E RL +A+ P P+KWWL FA+R+FM+ Sbjct: 4 YHSKFDTELKVLPLGNTNMGKLPIRTNFKGPAPQTNQD--DIIDEALTYFKPNIFFREFEIKGPADRTMIYLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDEMRAYLQQIRQEIGARLCDLAFPDPQDRPSKWWLCFARRRFMD 173
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_YEAST (Actin-related protein 2/3 complex subunit 3 OS=Saccharomyces cerevisiae GN=ARC18 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.480e-28 Identity = 68/173 (39.31%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 153 YHSSFVDEEGVTKACG-CPLLPLKSHIKGPAPASDQDRTDIVDEAITFFRANVFFRNFDIKSSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGLFALP-QSQKEAELFRNYLKQIREETSGRLLSVAYRPNGT---PNKWWLAFAKRKFMN 656 YHS+F + + G LLPL + +GPA S+ D DI+DE + FRAN FF+NF+IKS AD++LIY +IN L L+ + E K + N+ L+ +PG P FP ++ +P Q +L + Y++Q R+E + RLL Y + P+K+WLAF +R+FMN Sbjct: 4 YHSTFPVDPNTDRMVGNFALLPLNTKFRGPAYPSNSDY-DIIDECLDLFRANSFFKNFEIKSPADRVLIYGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDLLKTYIQQFRQELAMRLLERVYSSTDSKEYPSKFWLAFTRRRFMN 175
BLAST of CF838901 vs. ExPASy Swiss-Prot
Match: ARPC3_ENTHI (Probable actin-related protein 2/3 complex subunit 3 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.845e-13 Identity = 48/121 (39.67%), Postives = 67/121 (55.37%), Query Frame = 3 Query: 141 REMVYHSSFVDEEGVTKACGCPLLPLKSHIK-GPAPASDQDRTDIVDEAITFFRANVFFRNFDIK-SSADKLLIYLTFYINVALKRLEGRRTLAEGTKAIINLGLEKVPVPGEPNFPFPGL 497 R YHS +D++ V KA PL+ K+ +K P D DIVDEAIT+++ANVF++N D+ ADKLL YL FY+ L G RT + K +L +E +PG+ F G+ Sbjct: 5 RSGAYHSE-LDKDIVQKAGNFPLMQFKTKVKVNPKFLLKGDDMDIVDEAITYYKANVFYKNLDMSICEADKLLAYLMFYLQSLLLTFTG-RTKVDCDKMAFSLAIENFGLPGDGKFCLGGI 123 The following BLAST results are available for this feature:
BLAST of CF838901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838901 ID=CF838901; Name=CF838901; organism=Citrus sinensis; type=EST; length=797bpback to top |