CF931512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF931512 vs. ExPASy Swiss-Prot
Match: ROGF1_ARATH (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana GN=ROPGEF1 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 60/137 (43.80%), Postives = 94/137 (68.61%), Query Frame = 3 Query: 9 LTAESSSSGEMINFLNLKSEHSALEAINKLEAAVFTWKERISEQASGKSPVR-TSWSF-IKDPISELDKIEFLLERAEALIQQLKNRYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLANLAFSILSRIGDILQED 413 LTA S +++ L+L SEH LE N++EAAV W+++ + ++ ++ +SW +K +++ ++ +FL++RAE L+Q L+ R+P LPQT LD KIQY KDVG SILE+YSRV+ ++AF+I +RI D+L D Sbjct: 316 LTANKFSPECLLDCLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFLVQRAETLLQSLRIRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESMAFNITARIDDVLYVD 452
BLAST of CF931512 vs. ExPASy Swiss-Prot
Match: ROGF2_ARATH (Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana GN=ROPGEF2 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 27 SSGEMINFLNLKSEHSALEAINKLEAAVFTWKERISEQASGKSPVRTSWSFIKDPIS---ELDKIEFLLERAEALIQQLKNRYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLANLAFSILSRIGDILQED 413 S ++++ L + SEH AL+ +++EA+++TW+ + S ++SW+ +KD +S DK L ERAE+L+ LK RYP L QT LD KI KDVG ++LE+YSRVL LAF+I++ I D+L D Sbjct: 352 SPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNS-----KSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVD 478 The following BLAST results are available for this feature:
BLAST of CF931512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF931512 ID=CF931512; Name=CF931512; organism=Citrus sinensis; type=EST; length=715bpback to top |