CK739760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 2.570e-36 Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ + KD IKIHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ I K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ I K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ I K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M D++ Q+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ + KD IKIHGF Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.275e-35 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIKDSLAPGD-KGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 MVD D QIPTS+DPFA+ + + A G K YVH+R+QQRNG+K LTTVQGLK++ Y KILKDLKK CCNG VVNDK LGK IQLQGD RKNV F+V++ I KD+IK+H F Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.275e-35 Identity = 72/113 (63.72%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ + KD I+IHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.175e-35 Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M D+D QIPT++DPF++ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ I K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.267e-35 Identity = 72/113 (63.72%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 97 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 M + D+ IPT++DPFA+ + G K YVH+RVQQRNG+K LTTVQGLK+D+ Y KILKDLKKEFCCNG VV D LG+ IQLQGD RKNV FLV++ I K+ IKIHGF Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CK739760 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.013e-24 Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 127 SYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKGIQLQGDHRKNVMIFLVKSKIGDKDRIKIHGF 432 S+DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+ IQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CK739760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739760 ID=CK739760; Name=CK739760; organism=Citrus sinensis; type=EST; length=480bpback to top |