CK739814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24 Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 4 IAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 IA+ FG ++WD G K SK QDL N G+MY+ +FLG NA SV PV+ +ERTV+YRERAAGM++A+PYA QV+ AMIGF+W++GK Sbjct: 1192 IALIFGTMFWDLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGK 1295
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.298e-23 Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VIA+ FG I+WD G KT K QDL N G+MYS +F+G N+ SV PV+ VERTV+YRERAAGM++A PYA QVA +MIGFKW K Sbjct: 1221 VIALLFGTIFWDLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAK 1325
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.775e-23 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VI + FGL++W G K K+QDL N FGAMY+ +FLG +NA +V P + +ERTV+YRE+AAGM++A+PYA++QVA +MIG+ W + K Sbjct: 1206 VIGVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLFLGATNAATVQPAVAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVK 1310
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.931e-23 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VI + FGLI+W G KT +QDL N FGAMY+ +FLG NA +V P I +ERTV+YRE+AAGM++A+PYA++QVA +MIG W + K Sbjct: 1207 VIGVLFGLIFWQIGTKTENEQDLNNFFGAMYAAVLFLGALNAATVQPAIAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAK 1311
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.435e-22 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VIA+ FG I+WD G K +K QDL N G+MY+ +F+G N SV PV+ VERTV+YRERAAGM++A PYA QV AMIGF+W K Sbjct: 1214 VIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAK 1318
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.435e-22 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VIA+ FG I+WD G K +K QDL N G+MY+ +F+G N SV PV+ VERTV+YRERAAGM++A PYA QV AMIGF+W K Sbjct: 1214 VIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAK 1318
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.447e-22 Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 4 IAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKW 303 IA+ FG ++WD G KT +QDL N G+MY+ +FLG NA SV PV+ VERTV+YRE+AAGM++AMPYA AQV AMIGF+W Sbjct: 1180 IALMFGTMFWDLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEW 1279
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.196e-22 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VIA+ FG ++W+ G +T KQQDL N G+MY+ +++G N+ SV PV+ VERTV+YRERAAGM++A PYA QVA +MIGF+W + K Sbjct: 1206 VIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAK 1310
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.174e-22 Identity = 49/104 (47.12%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 4 IAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 IA+ FG ++WD G K S+ QDL N G+MY+ +FLG N+ SV PV+ VERTV+YRE+AAGM++A+PYA AQV +MIGF+W + K Sbjct: 1193 IALIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAK 1296
BLAST of CK739814 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.451e-22 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 1 VIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGK 315 VIA+ FG I+WD G K + QDL N G+MY+ +F+G N SV PV+ VERTV+YRERAAGM++A+PYA QVA +MIGF+W + K Sbjct: 1225 VIALIFGTIFWDLGGKMGQSQDLFNAMGSMYAAVLFIGVLNGQSVQPVVSVERTVFYRERAAGMYSALPYAFGQVAIEFPYTLVQSVIYSIIVYSMIGFQWTVAK 1329 The following BLAST results are available for this feature:
BLAST of CK739814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739814 ID=CK739814; Name=CK739814; organism=Citrus sinensis; type=EST; length=316bpback to top |