CK739874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.273e-18 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRTGWQ MSRNWGQNWQSN+YLNGQSLSF+VTTS Sbjct: 188 KGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTS 223 HSP 2 Score: 36.965 bits (84), Expect = 1.273e-18 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQFR 191 + S NVA AGWSFG+T++GAQ R Sbjct: 228 IVSNNVANAGWSFGQTFTGAQLR 250
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.153e-18 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRT WQ MSRNWGQNWQSN+YLNGQ+LSF+VTTS Sbjct: 187 KGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTS 222 HSP 2 Score: 40.817 bits (94), Expect = 2.153e-18 Identity = 15/23 (65.22%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQFR 191 V S+N APAGWS+G+T++G QFR Sbjct: 227 VVSFNAAPAGWSYGQTFAGGQFR 249
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.731e-18 Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRT WQ MSRNWGQNWQSN+YLNGQSLSF VTTS Sbjct: 192 KGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTS 227 HSP 2 Score: 40.0466 bits (92), Expect = 4.731e-18 Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQFR 191 V S+NVAP WSFG+TY+G QFR Sbjct: 232 VVSFNVAPPTWSFGQTYTGGQFR 254
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.353e-17 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGS TGWQPMSRNWGQNWQSN+YL+GQSLSF+V S Sbjct: 190 KGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVS 225 HSP 2 Score: 38.1206 bits (87), Expect = 1.353e-17 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQF 188 VTS NV PAGW FG+T+ G QF Sbjct: 230 VTSNNVVPAGWQFGQTFEGGQF 251
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.868e-17 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT S Sbjct: 185 KGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTAS 220 HSP 2 Score: 34.2686 bits (77), Expect = 3.868e-17 Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQF 188 VTS NVA GW FG+T+ G QF Sbjct: 225 VTSNNVAHPGWQFGQTFEGGQF 246
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.868e-17 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRTGWQPMSRNWGQNWQSN +L+GQSLSF+VT S Sbjct: 185 KGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTAS 220 HSP 2 Score: 34.2686 bits (77), Expect = 3.868e-17 Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQF 188 VTS NVA GW FG+T+ G QF Sbjct: 225 VTSNNVAHPGWQFGQTFEGGQF 246
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 3.152e-16 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRT WQ MSRNWGQNWQSN LNGQ+LSF+VT S Sbjct: 191 KGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTAS 226 HSP 2 Score: 38.5058 bits (88), Expect = 3.152e-16 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQFR 191 V S N+APA WSFG+T++G QFR Sbjct: 231 VVSNNIAPASWSFGQTFTGRQFR 253
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 7.311e-15 Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KG+ TGW PMSRNWGQNWQSN+ L GQ+LSF VT S Sbjct: 201 KGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGS 236 HSP 2 Score: 37.3502 bits (85), Expect = 7.311e-15 Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 126 TSYNVAPAGWSFGRTYSGAQFR 191 TS+N APAGW FG+T+ G FR Sbjct: 242 TSWNAAPAGWHFGQTFEGKNFR 263
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.605e-14 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KGSRTGW MSRNWG NWQSN YL+GQSLSF+VT+S Sbjct: 198 KGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSS 233 HSP 2 Score: 31.5722 bits (70), Expect = 1.605e-14 Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQ 185 +T +VAPAGW+FG+T+S +Q Sbjct: 238 LTFLDVAPAGWTFGQTFSTSQ 258
BLAST of CK739874 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 3.523e-14 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 1 KGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTS 108 KG+ T WQ MSRNWGQNWQSN L+GQ+LSF+VTTS Sbjct: 190 KGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTS 225 HSP 2 Score: 35.039 bits (79), Expect = 3.523e-14 Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 123 VTSYNVAPAGWSFGRTYSGAQFR 191 V S N P WSFG+TY+G QFR Sbjct: 230 VISNNATPRNWSFGQTYTGKQFR 252 The following BLAST results are available for this feature:
BLAST of CK739874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739874 ID=CK739874; Name=CK739874; organism=Citrus sinensis; type=EST; length=316bpback to top |