CK739875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.780e-20 Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 3 Query: 57 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 M++ ELAC YA LIL DDGIAIT +KIA +VKAAN+ +ESYWP+LFAKLLEKRN++DLI++V Sbjct: 1 MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSV 62
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana GN=RPP1A PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.740e-19 Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 + ELAC+YA +IL D+GIAIT DKIA LVKAA VSIESYWP LFAK+ EKRN+ DLIMNV Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana GN=RPP1C PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.279e-18 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 + ELAC+YA +IL D+GIAIT DKIA LVKAA V+IESYWP LFAK+ EKRN+ DLIMNV Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana GN=RPP1B PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.279e-18 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 + ELAC+YA +IL D+GIAIT+DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMNV Sbjct: 3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.288e-18 Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 57 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 MS SELACTYA LILHDDG+ IT D I + KAA V +E YWP+LFAKL K+++DDLI NV Sbjct: 1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITNV 62
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.256e-14 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 S SELAC Y+ LILHDD + +T DKI L+KAA VS+E +WP LFAK L N+ LI NV Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI NV Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI NV Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 60 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI NV Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNV 63
BLAST of CK739875 vs. ExPASy Swiss-Prot
Match: RLA1_DROME (60S acidic ribosomal protein P1 OS=Drosophila melanogaster GN=RpLP1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.617e-13 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 66 SELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMNV 242 +ELAC YA LIL DD +A+T +KI ++KAANV +E YWP LFAK LE N+ DLI N+ Sbjct: 5 AELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNI 63 The following BLAST results are available for this feature:
BLAST of CK739875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739875 ID=CK739875; Name=CK739875; organism=Citrus sinensis; type=EST; length=332bpback to top |