CK739901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.752e-27 Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP P+ V+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVF 50 HSP 2 Score: 53.5286 bits (127), Expect = 3.752e-27 Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PYAGGVFLVTIHFPPDYPF+ PK F Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.278e-27 Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP P+ V+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 50 HSP 2 Score: 52.373 bits (124), Expect = 8.278e-27 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PY+GGVFLVTIHFPPDYPF+ PK F Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.278e-27 Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP P+ V+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVF 50 HSP 2 Score: 52.373 bits (124), Expect = 8.278e-27 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PY+GGVFLVTIHFPPDYPF+ PK F Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.278e-27 Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP P+ V+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 50 HSP 2 Score: 52.373 bits (124), Expect = 8.278e-27 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PY+GGVFLVTIHFPPDYPF+ PK F Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.078e-26 Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP P+ V+ Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVF 50 HSP 2 Score: 51.9878 bits (123), Expect = 1.078e-26 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PYAGGVFLV+IHFPPDYPF+ PK F Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.156e-25 Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 200 MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGP Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGP 40 HSP 2 Score: 51.6026 bits (122), Expect = 1.156e-25 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PYAGGVFLV+IHFPPDYPF+ PK F Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVSF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.954e-23 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 200 MA++RILKELK+LQ+DPP SCSAGP EDMFHWQATIMGP Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGP 40 HSP 2 Score: 50.0618 bits (118), Expect = 4.954e-23 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PY+GGVFLV IHFPPDYPF+ PK F Sbjct: 43 SPYSGGVFLVNIHFPPDYPFKPPKVVF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.405e-22 Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 200 MASKRI KEL+DLQ+DPP SCSAGP +DMF WQATIMGP Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40 HSP 2 Score: 51.9878 bits (123), Expect = 2.405e-22 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +P+AGGVFLVTIHFPPDYPF+ PK F Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.742e-20 Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 3 Query: 81 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 MA KRI KEL DLQ+DPP CSAGPV +D+FHWQATIMGP P+ V+ Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVF 50 HSP 2 Score: 45.8246 bits (107), Expect = 2.742e-20 Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PY GGVF +TIHFP DYPF+ PK F Sbjct: 43 SPYQGGVFFLTIHFPTDYPFKPPKVAF 69
BLAST of CK739901 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.639e-20 Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 3 Query: 84 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPF**PHMQEVY 230 +SKRI KEL DL++DPPTSCSAGPV +D++HWQA+IMGP P+ V+ Sbjct: 3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVF 51 HSP 2 Score: 45.4394 bits (106), Expect = 4.639e-20 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 209 APYAGGVFLVTIHFPPDYPFQAPKGCF 289 +PYAGGVF ++IHFP DYPF+ PK F Sbjct: 44 SPYAGGVFFLSIHFPTDYPFKPPKISF 70 The following BLAST results are available for this feature:
BLAST of CK739901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739901 ID=CK739901; Name=CK739901; organism=Citrus sinensis; type=EST; length=290bpback to top |