CK739976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739976 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.876e-33 Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 2 Query: 8 VPGGAEAFELAAKFCYGINVELTLSNVATIRCVAHFLEMTEDFAEKNVEARAEAYLKEMVFPNTSNSISVLKCCEGLLPLSEEISLVNRLINAIANNACKEQLTSGL*S*TIPSQQKLHKILSQKHLRIGGE 403 +PGGAE FELAAKFCYGIN E+T SNVA + CV+ +LEMTE++++ N+ +R E YL+ +V N + VLK E LLPL++E++++ R I+AIA+ AC EQ+ S S +LH K GG+ Sbjct: 88 LPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHMSRQVKSSGDGGD 219 HSP 2 Score: 38.1206 bits (87), Expect = 8.876e-33 Identity = 14/27 (51.85%), Postives = 22/27 (81.48%), Query Frame = 1 Query: 391 DWWGKSLAVLNLDFFQRVLSAVKSRGL 471 DWW + L+VL +D +QRV++A+K RG+ Sbjct: 219 DWWIEDLSVLRIDLYQRVMNAMKCRGV 245
BLAST of CK739976 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-28 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 2 SAVPGGAEAFELAAKFCYGINVELTLSNVATIRCVAHFLEMTEDFAEKNVEARAEAYLKEMVFPNTSNSISVLKCCEGLLPLSEEISLVNRLINAIANNACKEQL 316 S +PGG E FE AAKFCYG+N E+T+ NVA + C A FL+MT+ + + N+ R + +L ++ + S +I VLK CE LLP+S ++ +V R ++ + AC E + Sbjct: 75 SDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAKACNEAM 179 HSP 2 Score: 39.2762 bits (90), Expect = 2.018e-28 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 1 Query: 382 TPSDWWGKSLAVLNLDFFQRVLSAVKSRGL 471 TP +WW + L +L++DFF V+S++K RG+ Sbjct: 184 TPPNWWTEELCILDVDFFSDVVSSMKQRGV 213
BLAST of CK739976 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.160e-27 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 8 VPGGAEAFELAAKFCYGINVELTLSNVATIRCVAHFLEMTEDFAEKNVEARAEAYLKEMVFPNTSNSISVLKCCEGLLPLSEEISLVNRLINAIANNAC 304 +PGG EAFELA+KFCYG+ V+LT +N++ +RC A +LEMTED E N+ + EA+L +V + +SI VLK CE L P +E + +V R +IA AC Sbjct: 98 LPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKAC 196 HSP 2 Score: 40.0466 bits (92), Expect = 2.160e-27 Identity = 16/51 (31.37%), Postives = 30/51 (58.82%), Query Frame = 1 Query: 322 WLVKLDHTFPAKTAQNIEPE-TPSDWWGKSLAVLNLDFFQRVLSAVKSRGL 471 W D +F ++N + P DWW + +++L +D F RV++A+K +G+ Sbjct: 225 WNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGM 275
BLAST of CK739976 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.920e-21 Identity = 40/100 (40.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 2 SAVPGGAEAFELAAKFCYGINVELTLSNVATIRCVAHFLEMTEDFAEKNVEARAEAYLKEMVFPNTSNSISVLKCCEGLLPLSEEISLVNRLINAIANNA 301 S +PGG + FEL AKFCYG+ +ELT SNV +RC A LEMTE+ E N+ ++ E + ++V + +SI L C+ +L ++E+++ + I ++A A Sbjct: 73 SDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRA 172 HSP 2 Score: 33.113 bits (74), Expect = 1.920e-21 Identity = 11/30 (36.67%), Postives = 22/30 (73.33%), Query Frame = 1 Query: 382 TPSDWWGKSLAVLNLDFFQRVLSAVKSRGL 471 T SDWW + ++L+ F+R+++ ++SRG+ Sbjct: 211 TSSDWWYEDASMLSFPLFKRLITVMESRGI 240
BLAST of CK739976 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.571e-19 Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = 2 Query: 8 VPGGAEAFELAAKFCYGINVELTLSNVATIRCVAHFLEMTEDFAEKNVEARAEAYLKEMVFPNTSNSISVLKCCEGLLPLSEEISLVNRLINAIANNAC 304 +PGGA +FELAA+F YG+ V+LT +N++ +RC A +LEMTE+ E N+ + EA+L +V + +SI+VLK CE L P +E + +V R +IA AC Sbjct: 105 LPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKAC 203 The following BLAST results are available for this feature:
BLAST of CK739976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739976 ID=CK739976; Name=CK739976; organism=Citrus sinensis; type=EST; length=522bpback to top |