CK739983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.346e-49 Identity = 92/111 (82.88%), Postives = 96/111 (86.49%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK+FDD TRE+P GHCLVAGIKK P KVI KDSAKKTAK SRVKAFVKLV+YQHLMPTRYTLDVDLK V D LQSKDKK+ A KETKK LEERFKT KNRWFFTKLRF Sbjct: 25 IVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135 HSP 2 Score: 33.4982 bits (75), Expect = 4.346e-49 Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 FLKPNK VILL GRYAG+ Sbjct: 4 FLKPNKAVILLQGRYAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 3.015e-47 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 I+KSFDD R+RP GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+LQSKDKK+ A KE K +LEERFKT KNRWFFTKLRF Sbjct: 25 IIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135 HSP 2 Score: 30.4166 bits (67), Expect = 3.015e-47 Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 FLK NK VILL GRYAG+ Sbjct: 4 FLKQNKAVILLQGRYAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.230e-45 Identity = 85/111 (76.58%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 I+KSFDD T +R GHCLVAG+KK P KVI KDSAKKTAK SRVK F+KLV+YQHLMPTRYTLDVDLK V T D+L+SKDKK+ A KE K +LEERFKT KNRWFFTKLRF Sbjct: 25 IIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135 HSP 2 Score: 30.4166 bits (67), Expect = 1.230e-45 Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 FLK NK VILL GRYAG+ Sbjct: 4 FLKQNKAVILLQGRYAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.567e-42 Identity = 81/111 (72.97%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVKSFDD T E+ GHCLVAG+KK P KVI KDSAKKTAK SRVK F K+++YQH+MPTRYTLD+DLK VV+AD++ SKDKK+ A KE K + EERFKT KNRWFFTKLRF Sbjct: 25 IVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135 HSP 2 Score: 26.5646 bits (57), Expect = 1.567e-42 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 87 LKPNKTVILL*GRYAGR 137 +KP K VILL GRY G+ Sbjct: 5 MKPGKAVILLQGRYTGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.393e-40 Identity = 79/115 (68.70%), Postives = 91/115 (79.13%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL----KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IV++FD+ TR+RP GHCLVAGI + P KVI KDSAKK K SRVKAF+KLV+Y H+MPTRYTLD DL K VV AD LQ++DKK+ A + TK RL ERFKT KNRWFFTKLRF Sbjct: 25 IVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138 HSP 2 Score: 33.4982 bits (75), Expect = 2.393e-40 Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 FLKPNK VILL G+YAGR Sbjct: 4 FLKPNKAVILLQGKYAGR 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.164e-31 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IV++FDD T RP GH LV G++K P KV + S KK AK S +K F+K V+Y HLMPTRYTLDVD K V A++ ++ KK+ A KE KK LEE+FKT KNRWFFTKLRF Sbjct: 25 IVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK-GVAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134 HSP 2 Score: 25.0238 bits (53), Expect = 2.164e-31 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 FLK K V++L GR+AG+ Sbjct: 4 FLKSGKVVVVLSGRFAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.224e-27 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL-KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK+ DD T +RP H LVAGI + P KV KK AK S++KAFVK+ +Y HLMPTRY++D+ L K VV D + K A +E K + EER+KT KN+WFF KLRF Sbjct: 25 IVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136 HSP 2 Score: 29.261 bits (64), Expect = 2.224e-27 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+KP K V++L GRYAGR Sbjct: 4 FMKPGKVVMVLAGRYAGR 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.224e-27 Identity = 59/112 (52.68%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL-KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK+ DD T +RP H LVAGI + P KV KK AK S++KAFVK+ +Y HLMPTRY++D+ L K VV D + K A +E K + EER+KT KN+WFF KLRF Sbjct: 25 IVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 HSP 2 Score: 29.261 bits (64), Expect = 2.224e-27 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+KP K V++L GRYAGR Sbjct: 4 FMKPGKVVMVLAGRYAGR 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 4.907e-27 Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL-KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK+ DD T +RP H LV+GI + P KV KK AK S++KAFVK+ +Y HLMPTRY++D+ L K +V D + K A +E K + EER+KT KN+WFF KLRF Sbjct: 25 IVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 HSP 2 Score: 29.261 bits (64), Expect = 4.907e-27 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+KP K V++L GRYAGR Sbjct: 4 FMKPGKVVMVLAGRYAGR 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 8.315e-27 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL-KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK+ DD T +RP H LVAGI + P KV KK AK S++K+FVK+ +Y HLMPTRY++D+ L K VV D + K A +E K + EER+KT KN+WFF KLRF Sbjct: 25 IVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 HSP 2 Score: 28.4906 bits (62), Expect = 8.315e-27 Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+KP K V++L GRY+GR Sbjct: 4 FMKPGKVVLVLAGRYSGR 21 The following BLAST results are available for this feature:
BLAST of CK739983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739983 ID=CK739983; Name=CK739983; organism=Citrus sinensis; type=EST; length=508bpback to top |