CK740107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 6.938e-81 Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 1 Query: 1 IDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 504 IDDD+PLAQFAVAF GASWTDPDS+ALMVMQ MLGSWNKN GGKH+GS+L QRV INEIAES+MAFNTNYKDTGLFGVYAVAK DCL+DL+YAIMYE TKLAYRVS+ADVTRARNQLKSSLLLH+DGTSP+AEDIGRQLLTYGRRIP AELFARID+VDASTVKRVA Sbjct: 329 IDDDLPLAQFAVAFEGASWTDPDSVALMVMQTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVA 496
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 5.941e-40 Identity = 78/168 (46.43%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA AVA WT PD+I LMV ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ +A+ E +L VSE++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+ V T Sbjct: 288 DDKMPLAHLAVAIEAVGWTHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCT 455
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 75/168 (44.64%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V T Sbjct: 288 DDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCT 455
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.729e-39 Identity = 76/168 (45.24%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA TV+RV T Sbjct: 288 DDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCT 455
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 6.569e-39 Identity = 74/168 (44.05%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V T Sbjct: 288 DDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCT 455
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 6.569e-39 Identity = 74/168 (44.05%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA AVA W PD+I LMV ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V T Sbjct: 289 DDKMPLAHLAVAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCT 456
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.406e-35 Identity = 70/168 (41.67%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA A+A G W +PD++AL V A++G ++ GG H+ S LA N++ +S FN +Y +TGL G + V ++D+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI+ VDA V+ V + Sbjct: 279 DDALPLAHVAIAVEGPGWANPDNVALQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVTRGKNILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCS 446
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.674e-34 Identity = 80/169 (47.34%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 7 DDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVATD 510 DD+P A A+A GASWT D L+V AM+GS+++ + G H S+LAQ V + +A S +FNT Y DTGL+G+Y + D L+DLA+ + E +LA SE +V A+ QLK+SLLL +DGT+PVAE+IGRQ+L YGRR+ E+ +D+V VKRVA + Sbjct: 265 DDMPTAHIALAVEGASWTSADHWPLLVASAMIGSYDR-AAGNAHPSSKLAQIVAKHNLANSFTSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANE 432
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.856e-34 Identity = 68/168 (40.48%), Postives = 105/168 (62.50%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +PLA A+A G W +PD++ L V A++G ++ GG H+ S LA N++ +S FN +Y DTGL G + V ++D+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA ++ + + Sbjct: 279 DDALPLAHVAIAVEGPGWANPDNVTLQVANAIIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICS 446
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 8.310e-34 Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 +D +PLA A+A G W PD++AL V A++G ++ GG H+ S LA N++ +S FN Y DTGL G + V ++D+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V + Sbjct: 279 EDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCS 446 The following BLAST results are available for this feature:
BLAST of CK740107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740107 ID=CK740107; Name=CK740107; organism=Citrus sinensis; type=EST; length=514bpback to top |