CK740194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.387e-75 Identity = 133/137 (97.08%), Postives = 137/137 (100.00%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 70 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206 HSP 2 Score: 95.9005 bits (237), Expect = 1.422e-19 Identity = 48/67 (71.64%), Postives = 50/67 (74.63%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEA + G G LG P Sbjct: 24 GLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 90
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.387e-75 Identity = 133/137 (97.08%), Postives = 137/137 (100.00%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 119 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255 HSP 2 Score: 98.2117 bits (243), Expect = 2.865e-20 Identity = 49/67 (73.13%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEA + G G LG P Sbjct: 73 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 139
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 4.071e-75 Identity = 132/137 (96.35%), Postives = 137/137 (100.00%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 138 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274 HSP 2 Score: 101.293 bits (251), Expect = 3.385e-21 Identity = 50/67 (74.63%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 92 GLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 158
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.069e-75 Identity = 133/137 (97.08%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 131 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267 HSP 2 Score: 103.219 bits (256), Expect = 8.908e-22 Identity = 51/67 (76.12%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.069e-75 Identity = 131/137 (95.62%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK Sbjct: 131 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 103.219 bits (256), Expect = 8.908e-22 Identity = 51/67 (76.12%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 9.069e-75 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 131 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 100.908 bits (250), Expect = 4.421e-21 Identity = 50/66 (75.76%), Postives = 51/66 (77.27%), Query Frame = 2 Query: 5 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 86 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.185e-74 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 131 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 103.219 bits (256), Expect = 8.908e-22 Identity = 51/67 (76.12%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 151
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.547e-74 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 HSP 2 Score: 101.679 bits (252), Expect = 2.592e-21 Identity = 50/67 (74.63%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEA + G G LG P Sbjct: 84 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 150
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.547e-74 Identity = 132/137 (96.35%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 131 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 101.293 bits (251), Expect = 3.385e-21 Identity = 49/67 (73.13%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEA + G G LG P Sbjct: 85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNP 151
BLAST of CK740194 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.547e-74 Identity = 131/137 (95.62%), Postives = 136/137 (99.27%), Query Frame = 3 Query: 141 VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 551 VWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 129 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 103.219 bits (256), Expect = 8.908e-22 Identity = 51/67 (76.12%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 2 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEARVVQGGGPDLQRGRA*LLGEP 202 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA + G G LG P Sbjct: 83 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149 The following BLAST results are available for this feature:
BLAST of CK740194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740194 ID=CK740194; Name=CK740194; organism=Citrus sinensis; type=EST; length=560bpback to top |