CK740326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.252e-65 Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384 FKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREY+RRVRE+VEQSWTAD Sbjct: 53 FKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWTAD 152 HSP 2 Score: 63.929 bits (154), Expect = 4.252e-65 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAPQDN+IMLWNAVIFGPDDTPWDGGT Sbjct: 26 GAPQDNNIMLWNAVIFGPDDTPWDGGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.603e-64 Identity = 95/100 (95.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384 FKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE+KREY+RRVRE+VEQSWTAD Sbjct: 53 FKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWTAD 152 HSP 2 Score: 63.929 bits (154), Expect = 1.603e-64 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAPQDN+IMLWNAVIFGPDDTPWDGGT Sbjct: 26 GAPQDNNIMLWNAVIFGPDDTPWDGGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.635e-64 Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM+SENKREY+R+VRE+VEQSWTAD Sbjct: 53 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWTAD 152 HSP 2 Score: 59.6918 bits (143), Expect = 4.635e-64 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP DN+I LWNAVIFGPDDTPWDGGT Sbjct: 26 GAPHDNNITLWNAVIFGPDDTPWDGGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.881e-64 Identity = 93/100 (93.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384 FKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARM+SE+KREY+RRVR++VEQSWTAD Sbjct: 53 FKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 HSP 2 Score: 63.929 bits (154), Expect = 7.881e-64 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAPQDN+IMLWNAVIFGPDDTPWDGGT Sbjct: 26 GAPQDNNIMLWNAVIFGPDDTPWDGGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 7.745e-58 Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375 FKLTL FTEDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+SPAN+EAAR+FSENKREY+R+V EIVEQS+ Sbjct: 53 FKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSY 149 HSP 2 Score: 58.5362 bits (140), Expect = 7.745e-58 Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAPQDN+IM WNA+IFGP+DTPWDGGT Sbjct: 26 GAPQDNNIMHWNALIFGPEDTPWDGGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.084e-53 Identity = 81/99 (81.82%), Postives = 96/99 (96.97%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTA 381 FKL+LQF+E+YPN PTV+F+S+MFHPN+YADGSICLDILQNQWSPIYD+AAILTSIQSLLCDPNPNSPANSE+AR+F ENKREY+R+V+EIVEQSW++ Sbjct: 53 FKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWSS 151 HSP 2 Score: 46.2098 bits (108), Expect = 4.084e-53 Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP +N+I++W AVIFGPDD+ W+G T Sbjct: 26 GAPLENNILMWQAVIFGPDDSIWEGAT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.816e-50 Identity = 77/97 (79.38%), Postives = 91/97 (93.81%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375 FKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 53 FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149 HSP 2 Score: 46.9802 bits (110), Expect = 1.816e-50 Identity = 18/27 (66.67%), Postives = 24/27 (88.89%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP +N+IM+WNAVIFGP+ TP++ GT Sbjct: 26 GAPSENNIMVWNAVIFGPEGTPFEDGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.816e-50 Identity = 77/97 (79.38%), Postives = 91/97 (93.81%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375 FKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 53 FKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149 HSP 2 Score: 46.9802 bits (110), Expect = 1.816e-50 Identity = 18/27 (66.67%), Postives = 24/27 (88.89%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP +N+IM+WNAVIFGP+ TP++ GT Sbjct: 26 GAPSENNIMVWNAVIFGPEGTPFEDGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.972e-49 Identity = 74/97 (76.29%), Postives = 89/97 (91.75%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375 FKLT++FTE+YPNKPPTVRFVS++FHPN+YADG ICLDILQN+WSP YDV+AILTSIQSLL DPNPNSPANS AA+++ EN+REY +RV+ VEQS+ Sbjct: 53 FKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSF 149 HSP 2 Score: 50.0618 bits (118), Expect = 1.972e-49 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP DN+IM+WNAVIFGP DTP++ GT Sbjct: 26 GAPTDNNIMIWNAVIFGPHDTPFEDGT 52
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.672e-49 Identity = 74/97 (76.29%), Postives = 90/97 (92.78%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375 FKL ++F+E+YPNKPPTVRF+S+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 53 FKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149 HSP 2 Score: 45.8246 bits (107), Expect = 9.672e-49 Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 3 GAPQDNSIMLWNAVIFGPDDTPWDGGT 83 GAP +N+IM WNAVIFGP+ TP++ GT Sbjct: 26 GAPSENNIMQWNAVIFGPEGTPFEDGT 52 The following BLAST results are available for this feature:
BLAST of CK740326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740326 ID=CK740326; Name=CK740326; organism=Citrus sinensis; type=EST; length=463bpback to top |