CK933142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.090e-43 Identity = 89/192 (46.35%), Postives = 123/192 (64.06%), Query Frame = 3 Query: 93 MGSSSDRLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 668 M SSSD+LF R RTIHEILGGG+ ADV+LWR KNV+VGI+ VT+A+W+VFE YT NRP+PPLPE +SE M E + +R VN L VS D+A+ ++S L+ +VA+ L+L+S +G L DF TL +TS+++V+T+PA YERYED+I K R+LY++++ Sbjct: 1 MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELYLRLE 192
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.961e-35 Identity = 78/215 (36.28%), Postives = 122/215 (56.74%), Query Frame = 3 Query: 75 FSVSSKMGSSSD-RLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 716 F ++ GSSSD RL RQ T+H+ +GGG AAD++LWR +++++G+++++ AW++FE SG NR LPEL LSEEMVN AA R ++N L ++ D+ +G + RLFF+V + LWL+S +G TL Y ++ +T+PALY +Y+ +DK +R+L Y +D+ +S++ W L K K Sbjct: 11 FDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL-SWSLSKDK 224
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31 Identity = 70/217 (32.26%), Postives = 120/217 (55.30%), Query Frame = 3 Query: 78 SVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID----KEFVSKVRKWILEKQK 716 S SS S RLF R++ +H++LGGG AD+ LWR K V+ G+L A+WV+FE Y ++ P +PE+H+ E+ + ++ + +R +N L++ +++A GK+ + F V LW++S +G +FLTL YT+ V++ T+P LYE+YED +D Y R++++ Y +D ++ +SK+ + L K+K Sbjct: 40 SSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.827e-29 Identity = 68/213 (31.92%), Postives = 116/213 (54.46%), Query Frame = 3 Query: 78 SVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 716 S SS M S RLF R++ +H++LGGG AD+ +W+ K ++ G+L AAWVVFE Y N+ P +PE+H+ EE + ++A+ +R +N S +++A G++ + F LW++S +GG +FLTL Y +LV++ T+P Y++YED +D +L++ Y +D++ +SK+ L+ +K Sbjct: 61 SPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.527e-29 Identity = 67/193 (34.72%), Postives = 107/193 (55.44%), Query Frame = 3 Query: 111 RLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 689 R+F R++ +H++LGGG ADV LWR K ++ +L V A WV+FE Y N+ +P +PE+H+ EE VA+ +R +N + + +ALG++ + F V + LW+IS VG +FLTL Y VI+ T+P LYE++ED +D A ++L++ YV D++ +SK+ Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 111 RLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 689 RLF R++ +H++LGGGL ADV LWR K ++ +L V A WV+FE Y N+ P +PE+H+ EE + + +R +N + + +ALG++ + F V LW+IS VG +FLTL Y V++ T+P LYE++ED +D A ++L++ Y+ D++ +SK+ Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28 Identity = 61/202 (30.20%), Postives = 109/202 (53.96%), Query Frame = 3 Query: 111 RLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKVRKWILEKQK 716 RLF R+R +H++LGGG AD+ +W+ K ++ G+ AWV+FE Y ++ P +PE+H+ EE + ++A+ +R +N +S +++A G++ + F LW++S +GG FLTL Y +LV++ T+P Y++YED +D Y +L++ Y +D + SK+ + L+ +K Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKK 269
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.231e-27 Identity = 63/202 (31.19%), Postives = 112/202 (55.45%), Query Frame = 3 Query: 84 SSKMGSSSDRLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 689 S+ + + RLF R++ +H++ GGG AD+ LWR K V+ G+L +W++FE Y ++ +PE+H+ E++V ++A+ +R +N +V +D+A G++ + F V LW++S VG +FLTL Y + V++ T+P LYE+YED +D + R++++ YV+ D + +SKV Sbjct: 38 SASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27 Identity = 67/190 (35.26%), Postives = 106/190 (55.79%), Query Frame = 3 Query: 126 QRTIHEILGGGLAADVILWR*KNVTVGILLV--TLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 689 + ++H+ + G AD+I+W KN G LL+ T W +FE+ GY+ NRP P LP L ++EE V VA IR +N L+V++++ +G+N++ FRV++ LW +SFVG +FLT+ Y +V+ L +P LYERY+D ID+ L +R ++ Y KID+ + K+ Sbjct: 2 EESVHQSIRFGSVADLIMW--KNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189
BLAST of CK933142 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25 Identity = 66/205 (32.20%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 75 FSVSSKMGSSSDRLFKRQRTIHEILGGGLAADVILWR*KNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDKEFVSKV 689 F + S +RLF RQ+ IH +LGGG +ADV+LWR K ++ +L+ A WV+FE + NR +P L L ++ EV + VN L QD+A N + F + LW+ + VG +FLT+ Y V T+P LYERYED +D + K Y K+D F+S++ Sbjct: 32 FEQEDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRI 236 The following BLAST results are available for this feature:
BLAST of CK933142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933142 ID=CK933142; Name=CK933142; organism=Citrus sinensis; type=EST; length=799bpback to top |