CK933941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933941 vs. ExPASy Swiss-Prot
Match: CHMO_ARATH (Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=At4g29890 PE=2 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.096e-58 Identity = 106/153 (69.28%), Postives = 129/153 (84.31%), Query Frame = 1 Query: 4 HVPYAHKGLASGLQLDSYSTTLYEKVSVQRCESGSTEGTDDTHRLGSKAFYAFIYPNFMINRYGPWMDTNLVIPLGPTRCEVVFDYFLDGSLMDDKAFIEQSLKDSEQVQIEDIILCEGVQRGLESPAYCSGRYAPSVEQAMYHFHSLLYCNL 462 HVPYAHKGL SGL L++YSTT++EKVS+Q C GS G D RLGS+A YAF+YPNFMINRYGPWMDTNLV+PLGP +C+VVFDYFLD SL DD+AFI++SL++S++VQ+ED++LCE VQRGLES AY GRYA VE+ M+HFH LL+ NL Sbjct: 269 HVPYAHKGLMSGLDLETYSTTIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDYFLDPSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFHCLLHHNL 420
BLAST of CK933941 vs. ExPASy Swiss-Prot
Match: CHMO_AMATR (Choline monooxygenase, chloroplastic OS=Amaranthus tricolor GN=CMO PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.219e-43 Identity = 82/153 (53.59%), Postives = 111/153 (72.55%), Query Frame = 1 Query: 4 HVPYAHKGLASGLQLDSYSTTLYEKVSVQRCESGSTEGTDDTHRLGSKAFYAFIYPNFMINRYGPWMDTNLVIPLGPTRCEVVFDYFLDGSLMDDKAFIEQSLKDSEQVQIEDIILCEGVQRGLESPAYCSGRYAPSVEQAMYHFHSLLYCNL 462 HVPYAHK A+ L D+Y T L EKV +QR S S + + RLGS+AFYAFIYPNF + RYGPWM T + PLGP +C++V DY+L+ ++M+DK +IE+S+ ++ VQ ED++LCE VQRGLE+PAY SGRY +E+ ++HFH L+ L Sbjct: 290 HVPYAHKYYAAELDFDTYKTDLLEKVVIQRVASSSNK-PNGFDRLGSEAFYAFIYPNFAVERYGPWMTTMHIGPLGPRKCKLVVDYYLENAMMNDKPYIEKSIMINDNVQKEDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHCWLHQTL 441
BLAST of CK933941 vs. ExPASy Swiss-Prot
Match: CHMO_SPIOL (Choline monooxygenase, chloroplastic OS=Spinacia oleracea GN=CMO PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.184e-42 Identity = 77/149 (51.68%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 4 HVPYAHKGLASGLQLDSYSTTLYEKVSVQRCESGSTEGTDDTHRLGSKAFYAFIYPNFMINRYGPWMDTNLVIPLGPTRCEVVFDYFLDGSLMDDKAFIEQSLKDSEQVQIEDIILCEGVQRGLESPAYCSGRYAPSVEQAMYHFHSLL 450 HVPYAHK A+ L D+Y T + E V++QR E GS+ D R+G +AFYAF YPNF + RYGPWM T + PLGP +C++V DY+++ S++DDK +IE+ + ++ VQ ED++LCE VQRGLE+PAY SGRY +E+ ++HFH L Sbjct: 287 HVPYAHKYYATELNFDTYDTQMIENVTIQRVE-GSSNKPDGFDRVGIQAFYAFAYPNFAVERYGPWMTTMHIHPLGPRKCKLVVDYYIENSMLDDKDYIEKGIAINDNVQREDVVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHCWL 434
BLAST of CK933941 vs. ExPASy Swiss-Prot
Match: CHMO_BETVU (Choline monooxygenase, chloroplastic OS=Beta vulgaris GN=CMO PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 76/150 (50.67%), Postives = 108/150 (72.00%), Query Frame = 1 Query: 4 HVPYAHKGLASGLQLDSYSTTLYEKVSVQRCESGSTEGTDDTHRLGSKAFYAFIYPNFMINRYGPWMDTNLVIPLGPTRCEVVFDYFLDGSLMDDKAFIEQSLKDSEQVQIEDIILCEGVQRGLESPAYCSGRYAPSVEQAMYHFHSLLY 453 HVPYAHK A+ L D+Y+T + EK +QR S S + D RLG++AFYAFIYPNF + RYG WM T V+P+G +C++V DY+L+ +++DDKA+I++ + ++ VQ ED +LCE VQRGLE+PAY SGRY +E+ ++HFH L+ Sbjct: 294 HVPYAHKYYAAELDFDTYNTEMIEKCVIQRVGSSSNK-PDGFDRLGTEAFYAFIYPNFAVERYGTWMTTMHVVPMGQRKCKLVVDYYLEKAMLDDKAYIDKGIAINDNVQKEDKVLCESVQRGLETPAYRSGRYVMPIEKGIHHFHCWLH 442
BLAST of CK933941 vs. ExPASy Swiss-Prot
Match: CHMO_ATRHO (Choline monooxygenase, chloroplastic OS=Atriplex hortensis GN=CMO PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.346e-40 Identity = 74/150 (49.33%), Postives = 106/150 (70.67%), Query Frame = 1 Query: 4 HVPYAHKGLASGLQLDSYSTTLYEKVSVQRCESGSTEGTDDTHRLGSKAFYAFIYPNFMINRYGPWMDTNLVIPLGPTRCEVVFDYFLDGSLMDDKAFIEQSLKDSEQVQIEDIILCEGVQRGLESPAYCSGRYAPSVEQAMYHFHSLLY 453 HVPYAHK A+ L D+Y T + V++QR S G + RLG++AFYAF YPNF + RYGPWM T ++PLGP +C++V DY+++ S +DDK +IE+ + ++ VQ ED++LCE VQ+GLE+PAY SGRY +E+ ++HFH L+ Sbjct: 288 HVPYAHKYYATELDFDTYQTDMVGNVTIQRVAGTSNNGFN---RLGTQAFYAFAYPNFAVERYGPWMTTMHIVPLGPRKCKLVVDYYIEKSKLDDKDYIEKGIAINDNVQKEDVVLCESVQKGLETPAYRSGRYVMPIEKGIHHFHCWLH 434 The following BLAST results are available for this feature:
BLAST of CK933941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933941 ID=CK933941; Name=CK933941; organism=Citrus sinensis; type=EST; length=542bpback to top |