CK933996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.474e-34 Identity = 78/187 (41.71%), Postives = 120/187 (64.17%), Query Frame = 3 Query: 96 ALLIILLQFSTNLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDE---LGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINSYAA 647 ALL+IL S A+ ++I+TSC+ T Y +C +SLS YA I++NP+ LA+TAL ++L T+ M ++++F G+ R+ A A+ DC+E + DS+D + S DE L H + ++F M +V+TWVSAALTDE TC+DG G+ ++ K +R ++ VA +TSNALAL+N++AA Sbjct: 12 ALLVILAAASAAPAN--------QFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYA-AIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.951e-16 Identity = 51/189 (26.98%), Postives = 104/189 (55.03%), Query Frame = 3 Query: 90 LVALLIILLQFSTNLASNPS----DNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKM-SRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHI-RNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 638 L+A ++ + +TN N +++ +++ CS T+Y LC+ +++ K ++ K + +LN+T KA K + K+ ++ G+ PRE A+ DC+E I +++DEL ++++L + + D++T +S+A+T++ TC+DG +R + + + + V H+ SNALA+I + Sbjct: 31 LLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVT-ALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKN 218
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.154e-15 Identity = 54/198 (27.27%), Postives = 108/198 (54.55%), Query Frame = 3 Query: 78 LRHALVALLIILLQFSTNLASNPSDN------SNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKS---TSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT--MGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 638 L A VALL + + ++ ++ S+ +R+SCS T Y LC ++ ++ K + ++N+T+ A + T + ++K + G+ PRE A+ DC+E I +++DEL +++++L H+ + L GD++T +S+A+T+++TC+DG ++ + + + + V H+ SNALA+I + Sbjct: 22 LLSAAVALLFVAAVAGISAGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRK--GLTPREKT-ALHDCLETIDETLDELHETVEDL-HLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKN 215
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15 Identity = 54/189 (28.57%), Postives = 99/189 (52.38%), Query Frame = 3 Query: 90 LVALLIILLQFSTNLASNPSDNSNIEY---IRTSCSGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 638 LV +I + N N DN N + +++SCS T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T++ TC+DG N++ + + + V + SNALA+I + Sbjct: 39 LVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.791e-15 Identity = 54/189 (28.57%), Postives = 99/189 (52.38%), Query Frame = 3 Query: 90 LVALLIILLQFSTNLASNPSDNSNIEY---IRTSCSGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 638 LV +I + N N DN N + +++SCS T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T++ TC+DG N++ + + + V + SNALA+I + Sbjct: 39 LVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.824e-13 Identity = 52/194 (26.80%), Postives = 108/194 (55.67%), Query Frame = 3 Query: 90 LVALLIILLQFSTNLASNPSDNSNI--------EYIRTSCSGTIYRRLCYRSL---SVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRF-PGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT-MGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALI 632 LVA +I ++ + + N D+++I ++++CS T++ LCY ++ S ++ K+ S K + +LNIT+KA + + ++ + G+ PRE A+ DC+E + +++DEL ++++L N + D++T +S+A+T+++TC+DG ++ + ++ + V + SNALA+I Sbjct: 31 LVAAVIGVVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQ-KDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKV-ALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.333e-12 Identity = 55/190 (28.95%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 93 VALLIILLQFSTNLASNPSDNSNIEYIRTS-------CSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKST---SRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALI 632 V L+ +++ + ++ N SDN+ E I TS C+ T Y+ C +L AK S+P L TA N T+K S+ M+++ + P A+ C E++ +I EL S +ELG + ++ W+SA ++ E TC+DG QG N I++ + LT N LA++ Sbjct: 24 VLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRK-DAKDTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDP-----RAKMALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGN--AGETIKKALKTAVQLTHNGLAMV 205
BLAST of CK933996 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11 Identity = 47/166 (28.31%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 153 NSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLK-----ATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALIN 635 N++++ ++ C+ T YR+ C +L + K ++P L TA N+T+K A KS + M ++ T A+ C E++ ++DEL +S +ELG + +++ W+SAA++ E+TC++G QG N +++ + LT N LA+I+ Sbjct: 52 NASVKAVKDVCAPTDYRKTCEDTL-IKNGKNTTDPMELVKTAFNVTMKQITDAAKKSQTIMELQKDS-------RTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGN--AGETMKKALKTAIELTHNGLAIIS 207 The following BLAST results are available for this feature:
BLAST of CK933996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933996 ID=CK933996; Name=CK933996; organism=Citrus sinensis; type=EST; length=918bpback to top |