CK934217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.288e-115 Identity = 202/223 (90.58%), Postives = 212/223 (95.07%), Query Frame = 3 Query: 78 MTKQHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 MTKQ WSPYDNNGGTCVA+AGADYCVIAADTRMSTG +ILTRDYSKI KLADKCVMASSGFQADV+ALQK+LA+RHLIYQHQHNKQMSCP M QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA+DLVKTCFASATERDIYTGD+LEIV+LN GI RE MELRKD Sbjct: 1 MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIRREEMELRKD 223
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 389.808 bits (1000), Expect = 9.885e-108 Identity = 190/223 (85.20%), Postives = 205/223 (91.93%), Query Frame = 3 Query: 78 MTKQHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 MTKQH WSPYDNNGGTCVAIAG+DYCVIAADTRMSTG SIL+RDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCP MAQLLSNTLY+KRFFPYY+FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L GI E M+LRKD Sbjct: 1 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 8.105e-102 Identity = 177/213 (83.10%), Postives = 196/213 (92.02%), Query Frame = 3 Query: 108 YDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 Y+NNGGTCVAIAGADYCV+AADTR+S G +ILTRD+SKIC+LADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DAVTPLSE EAVDLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_DICDI (Proteasome subunit beta type-1 OS=Dictyostelium discoideum GN=psmB1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.211e-58 Identity = 117/220 (53.18%), Postives = 152/220 (69.09%), Query Frame = 3 Query: 90 HPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTG-CSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 H + Y +NGGT +A+AG DYCVIA DTRMS G I TR Y+KI +L KCV+A+SG QAD ALQK L + ++ +H K MS P +AQ LSNTLYYKRFFPYY+FN++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+ + ++ V S + V VK SA ERDIYTGD +IVV++K G+H E EL+ D Sbjct: 20 HGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDV---SCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.890e-52 Identity = 103/216 (47.69%), Postives = 141/216 (65.28%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +A+AG D+ ++A+DTR+S G SI +RD K KL D V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P LDNQ+ + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K GI E + LRKD Sbjct: 26 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN----MENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.890e-52 Identity = 103/216 (47.69%), Postives = 141/216 (65.28%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +A+AG D+ ++A+DTR+S G SI +RD K KL D V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P LDNQ+ + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K GI E + LRKD Sbjct: 27 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN----MENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.005e-51 Identity = 105/216 (48.61%), Postives = 140/216 (64.81%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +AIAG D+ ++A+DTR+S G SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PLS A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.238e-51 Identity = 104/216 (48.15%), Postives = 141/216 (65.28%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +AIAG D+ ++A+DTR+S G SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PLS A+ LVK F SA ERD+YTGD L++ ++ K GI E + LRKD Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51 Identity = 104/216 (48.15%), Postives = 140/216 (64.81%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +AIAG D+ ++A+DTR+S G SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PL+ A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
BLAST of CK934217 vs. ExPASy Swiss-Prot
Match: PSB1_RAT (Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1 SV=3) HSP 1 Score: 199.134 bits (505), Expect = 2.475e-50 Identity = 103/216 (47.69%), Postives = 139/216 (64.35%), Query Frame = 3 Query: 99 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGCSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 746 +SPY NGGT +AIAG D+ ++A+DTR+S G SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY +RFFPYY +N++ GLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + + PL+ A+ LVK F SA ERD+YTGD L I ++ K GI E + LRKD Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240 The following BLAST results are available for this feature:
BLAST of CK934217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934217 ID=CK934217; Name=CK934217; organism=Citrus sinensis; type=EST; length=830bpback to top |