CK935223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.178e-56 Identity = 127/288 (44.10%), Postives = 173/288 (60.07%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLA--KSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLI--EEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRT-ELITDSLAVLANLA 856 DPV + TG TYDRSSI KW +GN+ CP TG I + C NGI LA RKS D ++P S AA A KL+++FL L G E +A EIR+ K++ FNRSC+V++GA+ PLL LL S D +QENA+A +L LSKH +GK I GLK+++++L G E R +A+ LFYL+SV+ Y +LIGE P AIP L+ ++ ++ D K++A++A+ GLL+ NH +VL AG VP+L D+L S + L D LA LA LA Sbjct: 303 DPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHD---DVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIA-GEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLA 586
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB19_ARATH (U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.199e-55 Identity = 123/290 (42.41%), Postives = 180/290 (62.07%), Query Frame = 2 Query: 5 ADPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIV--ESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIE--EGTDCGKKNAVVAIFGLLLSQ-GNHQKVLDAGTVPLLADILASSNRTELIT-DSLAVLANLA 856 +DPV + +G TYDRSSI KW +GN+ CPKTG I + NG+ + + G+K D+ ++ AA EA KL + FLA L G EE KA EIR+L K++ F RSC+VE+G + L+ +L S D +QENA+A ++ LSK +GK IV + GGL++I++VL G E+RQ AAA LFYL+S+ Y +LIGE AIP LV++++ + D K+NA++AI LL++Q NH ++L AG VP+L D++ S ++ +T DS+A+LA +A Sbjct: 292 SDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESL-----AAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMA 576
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.049e-47 Identity = 120/283 (42.40%), Postives = 167/283 (59.01%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV VSTGQTY+RSSIQKWL AG+ CPK+ I +C NGI L ++ + RT G ++++ + L +L GT E++ AA E+RLLAK N+ NR CI E+GAIP L+ LL SPD QE++V ALL LS + K IV++G + I++VLK+G S+EAR+ AAATLF L+ + + IG AI AL+ L+EEGT GKK+A AIF L + QGN + + G V L +L + ++ ++LA+LA L+ Sbjct: 263 DPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQN----QGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNG-SMEARENAAATLFSLSVIDENKVAIG-AAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAG-GGMVDEALAILAILS 538
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.273e-45 Identity = 116/283 (40.99%), Postives = 161/283 (56.89%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV VSTGQTY+R+ I+KW+ +G+ CP T I Q+C NG+ K + T PA + + + L +L EE+ AA E+RLLAK N NR CI E+GAIP LL+LL S D QE+AV ALL LS H K I+ SG + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIPALV L+ EG+ GKK+A A+F L + QGN + + AG VPL+ ++ + L+ +++A+L+ L+ Sbjct: 288 DPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT-------PACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILS 560
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.273e-45 Identity = 116/283 (40.99%), Postives = 161/283 (56.89%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV VSTGQTY+R+ I+KW+ +G+ CP T I Q+C NG+ K + T PA + + + L +L EE+ AA E+RLLAK N NR CI E+GAIP LL+LL S D QE+AV ALL LS H K I+ SG + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIPALV L+ EG+ GKK+A A+F L + QGN + + AG VPL+ ++ + L+ +++A+L+ L+ Sbjct: 288 DPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT-------PACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILS 560
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44 Identity = 119/285 (41.75%), Postives = 164/285 (57.54%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAK--SGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV VS+GQTY+R+ I+KW++ G+ CPKT I Q+C N I K S + R ++ P AEA K+ L RL +G E++ AA EIRLLAK N NR I E+GAIP L+ LL +PD +QE++V ALL LS + K IV +G + I++VLK G S+EAR+ AAATLF L+ + + IG AIP LV L+ EGT GKK+A A+F L + QGN K + AG +P L +L + ++ ++LA+LA L+ Sbjct: 271 DPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSP-----AEANKIED--LMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPG-SGMVDEALAILAILS 545
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42 Identity = 109/280 (38.93%), Postives = 154/280 (55.00%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGG-LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVL 844 DPV +STGQTYDR+SI +W++ G+ CPKTG I Q+C +GIS S + + + AA EA K L + L G+ + AA EIRLLAK+ NR+ I E+GAIP L LL S + QEN+V A+L LS + K I+E G L+ I+ VL SGL++EA++ AAATLF L++V Y+K I + + AL L++ GT GKK+AV A++ L N ++++ G V L L + E +LA+L Sbjct: 320 DPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALL 599
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42 Identity = 107/286 (37.41%), Postives = 162/286 (56.64%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAK---SGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV V+TGQTY+R+ IQ+W+ GN+ CPKT I ++CA++ I +GR ++I R L +RL + E++ A EIR L+K + NR I E+GAIP L+NLL S D QENA+ +L LS + + K++I+ +G + I++VL++G ++EAR+ AAATLF L+ + +IG + AIPALV L+E GT GKK+A A+F L + GN + + AG V L +L+ S R ++ ++L +L+ LA Sbjct: 256 DPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVI--------------RALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG-TMEARENAAATLFSLSLADENKIIIGGS-GAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLA 525
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.858e-40 Identity = 115/285 (40.35%), Postives = 159/285 (55.79%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLL-FSPDQCVQENAVAALLKLSKHTSGK-KVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV VS+GQTY+R I+KWL+ G++ CPKT I Q+C NGI K S+ ++ S E K+ L +L E++ AA EIRLLAK N NR I SGAIP L+NLL S D QE+AV ++L LS K K++ SG + I+ VL+ G S+EAR+ AAATLF L+ + + IG AIP LV L+ EG+ GKK+A A+F L + QGN K + AG VP+L +L + + ++ +SL++LA L+ Sbjct: 271 DPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLL--KLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKG-SMEARENAAATLFSLSVIDENKVTIGAAG-AIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL-TEPESGMVDESLSILAILS 550
BLAST of CK935223 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 4.736e-36 Identity = 101/283 (35.69%), Postives = 147/283 (51.94%), Query Frame = 2 Query: 8 DPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGXXXXXXXXXXXXXXXXXIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLFSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 856 DPV ++TGQTY++ SIQKW AG+ CPKT I Q+C N + + SP + K L L EE+ ++ ++RLLA+ N NR I +GAIP L+ LL PD +QENAV LL LS KK+I G + I+++L++G + EAR+ +AA LF L+ + + IG IP LV L++ GT GKK+A+ A+F L L+ N + +DAG V L ++L N +I ++L++L LA Sbjct: 305 DPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEK------------EVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENG-NREARENSAAALFSLSMLDENKVTIG-LSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKN-LGMIDEALSILLLLA 572 The following BLAST results are available for this feature:
BLAST of CK935223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935223 ID=CK935223; Name=CK935223; organism=Citrus sinensis; type=EST; length=856bpback to top |