CK935225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 2.388e-101 Identity = 173/190 (91.05%), Postives = 179/190 (94.21%), Query Frame = 1 Query: 265 MGKDXXXXXXXXXXRLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834 MGKD RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP GKDYSVQKMILGTHTSENEPNYLMLAQVQLPL+D+ENDARHYDDDRS+FGGFGCANGKVQIIQQINHDGEVNRARYMPQNPF+IATKTVSAEVYVFDYSKHPSKPPLDGAC+PDLRLRGHSTEGYGLSWS+FK Sbjct: 1 MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFK 190
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 7.189e-98 Identity = 167/190 (87.89%), Postives = 177/190 (93.16%), Query Frame = 1 Query: 265 MGKDXXXXXXXXXXRLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 834 MGKD RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP GKDYSVQKMILGTHTSE+EPNYLMLAQVQLPLDD+E++AR YDDDRS+FGGFGCA GKVQIIQQINHDGEVNRARYMPQNPF+IATKTV+AEVYVFDYSKHPSKPPLDGAC+PDL+LRGHS+EGYGLSWSKFK Sbjct: 1 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFK 190
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3) HSP 1 Score: 263.848 bits (673), Expect = 8.282e-70 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_MOUSE (Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=4) HSP 1 Score: 263.848 bits (673), Expect = 8.282e-70 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_HUMAN (Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3) HSP 1 Score: 263.848 bits (673), Expect = 8.282e-70 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_CHICK (Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 263.848 bits (673), Expect = 8.282e-70 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3) HSP 1 Score: 263.848 bits (673), Expect = 8.282e-70 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3) HSP 1 Score: 263.462 bits (672), Expect = 1.082e-69 Identity = 118/173 (68.21%), Postives = 145/173 (83.82%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3) HSP 1 Score: 263.077 bits (671), Expect = 1.413e-69 Identity = 118/173 (68.21%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+SV +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWN 186
BLAST of CK935225 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.410e-69 Identity = 119/173 (68.79%), Postives = 146/173 (84.39%), Query Frame = 1 Query: 307 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 825 R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+ E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYMPQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD-EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWN 185 The following BLAST results are available for this feature:
BLAST of CK935225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935225 ID=CK935225; Name=CK935225; organism=Citrus sinensis; type=EST; length=835bpback to top |