CK935408

Overview
NameCK935408
Unique NameCK935408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1813 contig Csv1_Contig1813:1..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BOR2_ARATH (Putative boron transporter 2 OS=Arabidopsis thaliana GN=At3g62270 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 7.376e-102
Identity = 185/271 (68.27%), Postives = 220/271 (81.18%), Query Frame = 3
Query:    3 VDETVFDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAISYNMTFEERAIDIDG-----GEILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRAYSPRVRELRVERSPSLSGKGLEVKKVPSPGPSNLGQSS 800
            VDET+FD++K+IDDLLP+EVKEQR+SNLLQA+MVGGCVAAMPLLK IPTSVLWGYFAFMAIE+LPGNQFWERILLLFTAPSRR+KVLE+NHATF+ETVPFK+IA FT+FQT YLL CFG+TWIPIAGV+FPLLIM L+PVRQY+LP+FFK+ HLQDLDAAEYEEAPA+ +++   E  +          EILDE ITRSRGE RH+ SPK+TSST T +      ++ ++ + +SPRV +LR E SP LSGKG   +  P P P N   SS
Sbjct:  441 VDETLFDIEKEIDDLLPIEVKEQRVSNLLQAVMVGGCVAAMPLLKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDNHATFVETVPFKTIAMFTIFQTTYLLTCFGLTWIPIAGVMFPLLIMFLIPVRQYILPRFFKSAHLQDLDAAEYEEAPALPFHLAVPEAEMGSTASYPCDSEILDEFITRSRGEFRHTCSPKVTSSTSTPV------YNRNLSQVFSPRVIDLRGEMSPRLSGKG---QNSPKPSPLNPSSSS 702          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BOR1_ARATH (Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.219e-96
Identity = 181/272 (66.54%), Postives = 218/272 (80.15%), Query Frame = 3
Query:    3 VDETVFDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAISYNMTFEER---AIDIDGG-EILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRAYSPRVRELRV-ERSPSLSGKGLEVKKVPSPGPSNLGQSSN 803
            VDET+FD++K+IDDLLPVEVKEQR+SNLLQ+ MVGGCVAAMP+LK IPTSVLWGYFAFMAIE+LPGNQFWERILLLFTAPSRR+KVLE+ HATF+ETVPFK+IA FTLFQT YLL+CFG+TWIPIAGV+FPL+IM L+PVRQYLLP+FFK  HLQDLDAAEYEEAPA+ +N+  E          G  EILDE++TRSRGE RH+ SPK+TSS+ T + ++      S+ + +SPRV  +R+ + SP + G      K  S G S L QSS+
Sbjct:  441 VDETLFDIEKEIDDLLPVEVKEQRVSNLLQSTMVGGCVAAMPILKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHATFVETVPFKTIAMFTLFQTTYLLICFGLTWIPIAGVMFPLMIMFLIPVRQYLLPRFFKGAHLQDLDAAEYEEAPALPFNLAAETEIGSTTSYPGDLEILDEVMTRSRGEFRHTSSPKVTSSSSTPVNNR------SLSQVFSPRVSGIRLGQMSPRVVGNS---PKPASCGRSPLNQSSS 703          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BORL1_ARATH (Boron transporter-like protein 1 OS=Arabidopsis thaliana GN=At3g06450 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.651e-85
Identity = 167/267 (62.55%), Postives = 200/267 (74.91%), Query Frame = 3
Query:    3 VDETVFDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAI-SYNMTFE---ERAIDI-DGGEILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRA----YSPRVRELRVERSPSLSGKGLEVKKVPSPG 776
            VDETVFD++ +++++LPVEVKEQR+SN LQA+MV GCVAAMPL+K+IP+SVLWGYFA+MAIE+LPGNQFWERI+LLFTAPSRR+KVLE+NHA FIETVPFK++A FTLFQT YLL+CFGITW+P+AGVLFPL+IM LVPVRQY+LP FFK  HLQDLDAAEYEEAPAI S+N+  E    RA    D GE++D M TRSRGEIR   S K+      S     +     + R      +PRV E    RS S    G E+    S G
Sbjct:  440 VDETVFDIETEVENILPVEVKEQRVSNFLQAMMVAGCVAAMPLIKRIPSSVLWGYFAYMAIESLPGNQFWERIVLLFTAPSRRFKVLEDNHAVFIETVPFKTMAMFTLFQTAYLLVCFGITWVPVAGVLFPLMIMFLVPVRQYVLPNFFKGAHLQDLDAAEYEEAPAILSFNLKPEGEVSRATSFADSGEVMDGMFTRSRGEIRKVSSLKLGGGGSGSTVGSPAGGGVELMRRVVSFQNPRVSEKVYIRSLSDFRGGGEISPRSSAG 706          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BORL3_ARATH (Putative boron transporter-like protein 3 OS=Arabidopsis thaliana GN=At1g74810 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.662e-61
Identity = 117/205 (57.07%), Postives = 154/205 (75.12%), Query Frame = 3
Query:    6 DETVFDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPA-------ISYNMTFEERAIDIDGGEILDEMITRSRGEIR 599
            +E+ FD +K +D  LPV V EQR+SNLLQ+L+V G V A+P++K IPTS+LWGYFA+MAI++LP NQF+ER +LLF  P+RR+KVLE  HA+F+E VP KSIAAFTLFQ +Y  LC+G+TWIP+AG++FP+L  LLV +RQYLLPK FK  +L++LDAAEYEE P        +S+      R +     EILDE +T SRGE++
Sbjct:  448 EESGFDPEKHVDAYLPVRVNEQRVSNLLQSLLVIGAVFALPVIKLIPTSLLWGYFAYMAIDSLPDNQFFERTVLLFVPPTRRFKVLEGAHASFVEKVPHKSIAAFTLFQILYFGLCYGVTWIPVAGIMFPVLFFLLVAIRQYLLPKLFKPAYLRELDAAEYEEIPGTPRNPLELSFRSNNSARGVQECDAEILDE-LTTSRGELK 651          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BORL2_ARATH (Boron transporter-like protein 2 OS=Arabidopsis thaliana GN=At1g15460 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.836e-61
Identity = 114/205 (55.61%), Postives = 151/205 (73.66%), Query Frame = 3
Query:    6 DETVFDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPA-------ISYNMTFEERAIDIDGGEILDEMITRSRGEIR 599
            +E+ FD +K +D  LPV V EQR+SNLLQ+L+V G V AMP +K IPTS+LWGYFA+MAI++LPGNQF+ER+ LLF   SRR+KVLE  HA+F+E VP+KS+AAFTL Q  Y  LC+G+TWIP+AG++FP+   LL+ +RQY+LPK F   HL++LDAAEYEE P        +S+     +R +     EILDE +T SRGE++
Sbjct:  448 EESGFDPEKHLDAYLPVRVNEQRVSNLLQSLLVAGAVLAMPAIKLIPTSILWGYFAYMAIDSLPGNQFFERLTLLFVPTSRRFKVLEGAHASFVEKVPYKSMAAFTLLQIFYFGLCYGVTWIPVAGIMFPVPFFLLIAIRQYILPKLFNPAHLRELDAAEYEEIPGTPRNPLELSFRSNDSKRGVQEGDAEILDE-LTTSRGELK 651          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: BORL4_ARATH (Putative boron transporter-like protein 4 OS=Arabidopsis thaliana GN=At4g32510 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.685e-56
Identity = 110/213 (51.64%), Postives = 147/213 (69.01%), Query Frame = 3
Query:   18 FDVDKDIDDLLPVEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEE---APAISYNMTF---------------EERAIDIDGGEILDEMITRSRGEIRH 602
            FD +  I+D LPV V EQR+SNLLQ+++VG  + A+P+L+ IPTSVLWGYF +MA+++LPGNQFWER+ LLF  P RR+KVLE  HA+F+E VP+KSI  FTLFQ +Y L+C+G+TWIP+ G+LFPL   +L+ +RQY+L + F   HLQ LD++EYEE   AP  + +  F               E    +    EILDE IT SRGE++H
Sbjct:  480 FDPEVHIEDHLPVRVNEQRVSNLLQSVLVGLLILAVPVLRMIPTSVLWGYFTYMAVDSLPGNQFWERLQLLFITPGRRFKVLEGLHASFVEIVPYKSIVMFTLFQLLYFLICYGVTWIPVGGILFPLPFFILIALRQYILQRLFDPSHLQVLDSSEYEEMVGAPQRNSSFGFNGELREAHNIPLSVVENSEDEFYDAEILDE-ITTSRGELKH 691          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3AT_HUMAN (Band 3 anion transport protein OS=Homo sapiens GN=SLC4A1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.513e-17
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDA 479
            EVKEQR+S LL A++VG  +   P+L +IP +VL+G F +M + +L G Q ++RILLLF  P     V       +++ V    +  FT  Q    ++C  + W+     A +  P +++L VP+R+ LLP  F+ V LQ LDA
Sbjct:  755 EVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDV------PYVKRVKTWRMHLFTGIQ----IICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLDA 888          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3AT_CHICK (Band 3 anion transport protein OS=Gallus gallus GN=SLC4A1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.312e-17
Identity = 58/152 (38.16%), Postives = 89/152 (58.55%), Query Frame = 3
Query:   54 VEVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAE----YEEA 497
            VEVKEQRLS LL A+++G  +   P+LK IP +VL+G F +M + +L G Q ++RILLL   P    K   E + T ++T     I +  L Q + + L +G+   P A +  P +++L VP+R+ LLP+ F  + L+ LD  +    +EEA
Sbjct:  765 VEVKEQRLSGLLVAVLIGVSILMEPILKYIPLAVLFGIFLYMGVTSLFGIQLFDRILLLLMPPKYHPK---EPYVTRVKT---WRITSSPLTQILVVALLWGVKVSP-ASLRCPFVLVLTVPLRRLLLPRIFSEIELKCLDTDDAVVTFEEA 909          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3AT_RAT (Band 3 anion transport protein OS=Rattus norvegicus GN=Slc4a1 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 9.550e-17
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLD 476
            EVKEQR+S LL +++VG  +   P+L +IP +VL+G F +M I +L G Q ++RILLLF  P     V       F++ V    +  FT  Q    ++C  + W+     A +  P +++L VP+R+ LLP  F+ + LQ LD
Sbjct:  771 EVKEQRISGLLVSVLVGLSILMEPILSRIPLAVLFGIFLYMGITSLSGIQLFDRILLLFKPPKYHPDV------PFVKRVKTWRMHLFTGIQ----IICLAVLWVVKSTPASLALPFVLILTVPLRRLLLPLIFRELELQCLD 903          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3AT_MOUSE (Band 3 anion transport protein OS=Mus musculus GN=Slc4a1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 51/143 (35.66%), Postives = 81/143 (56.64%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLD 476
            EVKEQR+S LL +++VG  +   P+L +IP +VL+G F +M + +L G Q ++RILLLF  P     V       F++ V    +  FT  Q    ++C  + W+     A +  P +++L VP+R+ +LP  F+ + LQ LD
Sbjct:  773 EVKEQRISGLLVSVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDV------PFVKRVKTWRMHLFTGIQ----IICLAVLWVVKSTPASLALPFVLILTVPLRRLILPLIFRELELQCLD 905          
The following BLAST results are available for this feature:
BLAST of CK935408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
BOR2_ARATH7.376e-10268.27Putative boron transporter 2 OS=Arabidopsis thalia... [more]
BOR1_ARATH1.219e-9666.54Boron transporter 1 OS=Arabidopsis thaliana GN=BOR... [more]
BORL1_ARATH1.651e-8562.55Boron transporter-like protein 1 OS=Arabidopsis th... [more]
BORL3_ARATH1.662e-6157.07Putative boron transporter-like protein 3 OS=Arabi... [more]
BORL2_ARATH2.836e-6155.61Boron transporter-like protein 2 OS=Arabidopsis th... [more]
BORL4_ARATH4.685e-5651.64Putative boron transporter-like protein 4 OS=Arabi... [more]
B3AT_HUMAN2.513e-1737.50Band 3 anion transport protein OS=Homo sapiens GN=... [more]
B3AT_CHICK7.312e-1738.16Band 3 anion transport protein OS=Gallus gallus GN... [more]
B3AT_RAT9.550e-1737.06Band 3 anion transport protein OS=Rattus norvegicu... [more]
B3AT_MOUSE2.128e-1635.66Band 3 anion transport protein OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935408 ID=CK935408; Name=CK935408; organism=Citrus sinensis; type=EST; length=932bp
GGGTTGATGAGACTGTTTTTGATGTGGATAAGGATATTGATGATCTTTTA
CCTGTTGAAGTCAAGGAACAACGTCTCAGCAATCTGCTGCAGGCATTGAT
GGTTGGCGGTTGTGTTGCTGCTATGCCTCTCCTGAAGAAGATCCCTACTT
CTGTTCTTTGGGGCTACTTTGCCTTCATGGCCATTGAGAACTTGCCTGGA
AATCAATTTTGGGAGAGGATATTATTGCTTTTCACTGCTCCAAGCCGCAG
ATACAAGGTTTTGGAGGAGAATCATGCAACATTCATTGAGACTGTTCCCT
TCAAATCAATTGCTGCCTTTACTTTGTTCCAGACAGTCTACCTGCTTCTT
TGCTTTGGCATAACATGGATTCCCATAGCTGGCGTCCTTTTCCCACTGTT
GATCATGCTTCTTGTCCCTGTGCGGCAATATTTGCTCCCAAAGTTTTTCA
AAGCTGTTCATCTTCAAGATTTGGATGCTGCAGAATATGAGGAAGCTCCT
GCCATTTCTTACAATATGACATTTGAAGAAAGAGCCATCGACATTGATGG
AGGGGAAATTTTAGATGAAATGATCACACGAAGCCGTGGTGAGATTCGCC
ACTCACAGAGTCCTAAAATTACTAGTTCAACTCCAACTTCACTTGAGGAT
AAAAGATCTCCTCACAGTCCATCGATGCAAAGGGCATATAGTCCCCGTGT
TAGAGAACTGAGGGTGGAAAGAAGCCCCAGCTTGAGCGGAAAAGGGCTAG
AAGTAAAGAAAGTTCCCAGTCCCGGGCCATCTAACCTTGGACAAAGCAGT
AACGGTTCATCTCCATGCTAAAGTCTTGAATGCATAATCCACATGAGTTT
ATTTGTCAATGGTGCTCGAGAGGTCTTGTACTAAGTTCATNNNACTACGT
GTTAGATGTGCTTCTCTTCCTATTTCTAACCA
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