CK935497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_CHICK (UPF0549 protein C20orf43 homolog OS=Gallus gallus GN=RCJMB04_16p11 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.563e-16 Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 285 VDPAFQKSPNLPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 +D + K+P + S+IK LK++ + L+ P G +E+ G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NGN+E++ VL++RM Sbjct: 67 LDKSADKTPM--EAASHIKSLKNVTELNLADNPAWSGDKESKKGDTYDDIQSARFICPVVGLEMNGRHRFCFLRNCGCVFSERALKEIKTEVCHKCGVPFQEEDVIILNGNKEDVEVLKKRM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_PONAB (UPF0549 protein C20orf43 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ RM Sbjct: 75 LGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_HUMAN (UPF0549 protein C20orf43 OS=Homo sapiens GN=C20orf43 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.959e-16 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ RM Sbjct: 75 LGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_MACFA (UPF0549 protein C20orf43 homolog OS=Macaca fascicularis GN=QccE-12445 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+IK +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG E++ VL+ RM Sbjct: 75 LGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_RAT (UPF0549 protein C20orf43 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+I+ +K++ +KLS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++ +L+ RM Sbjct: 75 LGKATSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_BOVIN (UPF0549 protein C20orf43 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.957e-15 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+IK +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ R+ Sbjct: 75 LGKAASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVEVLKSRI 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_PIG (UPF0549 protein C20orf43 homolog OS=Sus scrofa PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+IK +K++ ++LS P E + GD RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++++L+ RM Sbjct: 75 LGKAASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRM 186
BLAST of CK935497 vs. ExPASy Swiss-Prot
Match: CT043_MOUSE (UPF0549 protein C20orf43 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15 Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 315 LPKQYSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERM 617 L K S+I+ +K++ ++LS P G + N G RF CP+ GLE NG++RF +R CG V S +ALKE+K+ C C F E D I++NG +E++ +L++RM Sbjct: 75 LGKAASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRM 186 The following BLAST results are available for this feature:
BLAST of CK935497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935497 ID=CK935497; Name=CK935497; organism=Citrus sinensis; type=EST; length=905bpback to top |