CK935545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.590e-27 Identity = 96/336 (28.57%), Postives = 149/336 (44.35%), Query Frame = 2 Query: 8 KEEDGVLATNYNVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSL----------------------CSDPYFAKIHLARAPFSIMILEKFCKRIYTNSLVPLFTLNQGDKERLSLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRK-NVATRIRGFGYNHCTNQYKVIQIL-----------SYKDQAAISSSKPQVEVHTIGTNT------WRNIGDLPYVLNQPYYGAFLNSALHWYA----HSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRYGVKESWTKEFVI 883 K D V +E LP I+ D+FSRLPI +I ++ VC++W S+ C P +H + L + KRI T F + + ++ SCNGL+CL + Y D + + NP + L LP+ K + + GFG++ T +YKV++I+ Y+ + I + +V++ T+ + T WR++G PY + A +N LH+ H D++ SFDL DE+F++ P P + N V + G + G LDIW+MK YGVKESW KE+ I Sbjct: 11 KITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLH-------FLDLSEEEKRIKTKKFTLRFASSMPE---FDVVGSCNGLLCLSDSLY-NDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRK---FVSFDLEDEEFKEIPKPDCGGLNR---TNHRLVNLKGCLCAVVYGNY-GKLDIWVMKTYGVKESWGKEYSI 328
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana GN=At3g23880 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.583e-21 Identity = 74/301 (24.58%), Postives = 141/301 (46.84%), Query Frame = 2 Query: 47 SMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHL-----------ARAPFSIMILEKF-----CKRIYTNSLVPLFTLNQGD---KERLSLLSSCNGLICLHEFSYKQDIISVCNPI--LGDHLVLPQLKRKNVATRIR-GFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLP---YVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKC-RPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRYGVKESWTK 871 S +LPL ++ ++ RLP+K++ + KCVC +W SL S+ FA H ++P+ ++ ++ C N+ + + G+ ++ ++ +C+GL+C H Y + + + NP L L L+ + + GFGY+ + YKV+ +L + Q I + ++++ WR+ P V ++ G ++N L+W A S + S+D+ ++F++ PGP C R ++++G G L + N D+W+MK +G SW+K Sbjct: 10 SPHNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFH-VDYDKSLY-LWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQRHQVKI-----ETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAATSSSSSWTII-SYDMSRDEFKELPGPVC-----CGRGCFTMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSK 297
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB233_ARATH (F-box protein At4g12560 OS=Arabidopsis thaliana GN=At4g12560 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19 Identity = 83/310 (26.77%), Postives = 146/310 (47.10%), Query Frame = 2 Query: 50 MEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFS---IMILEKFCKRIYTNSLVPLFTLNQGDKER-----LSLLSSCNGLICLHEFSYKQDIISVCNPILGD-HLVLPQLKRKNVATRIRGF-----GYNHCTNQYKVIQILSYK--DQAAISSSKP-QVEVHTIGTNTWRNIGDLP-----------YVLNQPYYGAFLNSALHWYAHSHDKRTAF--MCSFDLGDEQFR--QFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRYGVKESWTKEFVI 883 M +P+ I+ D+F RLP KT+++ + + K + L +DP F + HL R + +MIL + R+Y+ L L +++ + + S NGLI L S ++V NP H + P + RG+ GY+ ++ YKV++++ +K + + S P +V+V ++ N+W+ I + ++L + YG ++LHW AF + FDL E+F +FP + + +GV G L L + + +D+W+MK Y V++SWTK F + Sbjct: 1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALRLYSVDLDSLDSVSDVEHPMKRGGPTEVFGSSNGLIGL---SNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQ----MDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTV 303
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana GN=At3g06240 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16 Identity = 67/238 (28.15%), Postives = 112/238 (47.06%), Query Frame = 2 Query: 197 FSIMILEKFCKRIYTNSLVPLFTLNQGDKER--LSLLSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQ--------LKRKNVATRIRGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYVLNQPYY--GAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKC-RPINSISVGVSGGFLYLCDGFLEPNLDIWIMKRYGVKESWTK 871 FS MI +Y + V L LN R + ++ S NGL+C+ S + + + NP GD LP+ +R N T GFG++ T+ YK++++++ + +S V+++ ++WR I +L Y N Y G N A+HW + +FD+ E+FR+ P P E E C ++ VG G L + + + + DIW+M YG +SW++ Sbjct: 131 FSEMIRNYVGDHLYDDRRVML-KLNAKSYRRNWVEIVGSSNGLVCI---SPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTY--GFGFDGLTDDYKLVKLVATSEDILDAS------VYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPD--EAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 354
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBL40_ARATH (F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana GN=At2g43260 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 85/303 (28.05%), Postives = 130/303 (42.90%), Query Frame = 2 Query: 47 SMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFSIMILEKF-CKRIYTNSLVPLFTLNQGDKERLSL-------LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRI------------RGFGYNHCTNQYKVIQILSYKDQAAISSSKPQVE--VHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYLCDGFLEPN--LDIWIMKRYGVKESWTKEFVI 883 S++ LP +L +V RLP K+IL+ + V K W SL FA+ H++ IL + C L+P +GD+E + L +C G+IC E QD I V NP P N RI GFG + +YKV++ +S+ + +P VE V + T WR + PYV+N +N +++W H + + + DL E+F + P PPT+ + +N L L + P L++W M Y KE W+K + I Sbjct: 10 SIDILP-ELLEEVLLRLPTKSILKCRIVSKQWRSLLESSRFAERHMSLQNSRRRILAAYNCDCGGRRKLLPESRF-EGDEEIVYLHCDASRPSMTCQGVICFPE----QDWIIVLNPSTSQLRRFPSGLNHNCRFRIGLWKTFSPGNWVMGFGRDKVNGRYKVVR-MSFAFW-RVRQEEPVVECGVLDVDTGEWRKLSPPPYVVNVGSKSVCVNGSIYWL---HIQTVYRILALDLHKEEFHKVPVPPTQITVDTQMVN------LEDRLVLAITRVSPEWILEVWGMDTY--KEKWSKTYSI 293
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB205_ARATH (F-box protein At3g57590 OS=Arabidopsis thaliana GN=At3g57590 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 65/240 (27.08%), Postives = 110/240 (45.83%), Query Frame = 2 Query: 50 MEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARA---PFSIMILEKFCKRIYTNSLVP-----------LFTLNQGDKERLSLLSSCNGLICLHEFSYKQDIISV-CNPILGDHLVLPQLKRKNVATRIRGF-GYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTN--TWR-NIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQF 712 ME +P +++++FSRLP K+++ + + K W S+ P F ++ L R+ P + E+ + ++ +S P T GD R + S +GL+C + +D V CNP G + LP L R A RGF G++ Q+KV+ + S + E+ T+GT +WR NI P G +N L++ A + + + FD+ E+F+ F Sbjct: 1 MEPIPNDLILEIFSRLPAKSVIGFRTLSKHWASILRSPVFTELFLTRSSNRPRLLFAAERNGEWLFFSSPQPQNRYEKSSHLDYHTKFSGDVSRF-ICSYVSGLLCFPDLWLSKDASPVICNPTTGMYESLPDLMRYKNA---RGFLGFDPIGKQFKVL-----SEAYPFSDQREHHEILTLGTEELSWRSNIISCPAYDRSLSEGICINGVLYYLAQTLGVPSCVIICFDVRSEEFKYF 231
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB176_ARATH (Putative F-box protein At3g22650 OS=Arabidopsis thaliana GN=At3g22650 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 73/294 (24.83%), Postives = 143/294 (48.64%), Query Frame = 2 Query: 59 LPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHL---------ARAPFSIMILEKFCKRIYTNSLVPLFTLNQGDKERLSLLSSCNGLI---CLHE--FSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGY-NHCTNQYKVIQIL--SYKDQAAISSS-KPQVEVHTIGTNTWRNIGD--LPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISV-GVSGGFLYLCDGFLEP-NLDIWIMKRYGVK-ESWTK 871 LP+ I+ ++ R+P++ + Q K CK W +L D F +L R + I++ K ++S +P N ++S + C+GL+ C +E SYK ++V NP L + + + + GFGY N C ++YK+++I +D++ I+ S +P+++++ +++WR + D L + ++ P G + ++W AH +++ F+ SFD E F+ P +C +++ ++ + G L L E +++WI + + SWTK Sbjct: 9 LPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFIYKYLDLFQEQERFIRIDRIVQIIDP-VKGARSSSPIPQEFDNVA---QISTMVHCDGLLLCRCKNERSRSYK---LAVWNPFLSRVKWIEPMDFYS-SNDFYGFGYDNVCRDEYKLLRIFDGEIEDESEIAGSYEPKIQIYDFKSDSWRIVDDTRLDWSIDPPCKGVSVKGNMYWIAHWNNRPEIFIQSFDFSTETFKIVCNLPF----ECNVLDTAALSSLRGDRLSLLHQSGETMKIEVWITNKLSDEVVSWTK 290
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBK59_ARATH (F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana GN=At3g17530 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 61/242 (25.21%), Postives = 109/242 (45.04%), Query Frame = 2 Query: 50 MEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLARAPFSIMILEKFCKRIYTNSL----------------VPLFTLNQGDKERLSLLSSCNGLICLHEFSYKQDIISVCNPILGD-HLVLPQLKRKNVATRIRGFGYNHCT-NQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGP 721 + DLP + ++ SR+P K++ + K CK W++L DP F K + +A MI+ R+Y+NS+ L LN +S + C+GLI + + + V NP G+ + P++ + G+G + + + YK+++ Y +S + E++ T++WR++GD+ + G L +W + S +K FM FD E F + P P Sbjct: 7 ISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKNFDKAGGREMIV-LMNSRVYSNSVNLQGINNRFDPSMEVTGKLIKLNDSKGVDISAIFHCDGLILC--TTTESTGLVVWNPCTGEIRCIKPRIFYRCNDRYALGYGNSKSSCHSYKILRSCCYYVDQNLSLMAAEFEIYDFSTDSWRDLGDITRDMIVYSSGVSLKGNTYWVSGSKEK-GFFMRYFDFSKEVFGRLPLP 244
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FBK75_ARATH (F-box/kelch-repeat protein At3g59610 OS=Arabidopsis thaliana GN=At3g59610 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12 Identity = 71/275 (25.82%), Postives = 127/275 (46.18%), Query Frame = 2 Query: 56 DLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYF--AKIHLARAPFSIMILEKFCKRIYTNSLVPLFTLNQ------GDKERLSL-LSSCNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGFGYNHCTNQYKVIQIL-SYKDQAAISSSKPQVEVHTIGTNTWRN--IGDLPYVLNQPYYGAFLNSALHWYAHSHDKRTAFMCSFDLGDEQFRQFPGPPTREYEKCRPINSISVGVSGGFLYL-CDGFLEPNLDIWIMK 841 DLP + ++ S LPI+ + + +CVCK W++L + F + + LAR F ++ K C + N P ++ G K + + + C+GL L+ Y I +CNP L + K G GY++ + Q K +IL SY +++S V +G++ W++ + L+ Y LN L+W A++H+ R F+ SFD F+ + PT+ + S+++ F +L + + N++IW+ K Sbjct: 7 DLPYDLEGEILSHLPIQILARFRCVCKRWNTLFKERRFFNSDLGLARPQFILLAESKICS-VDVNLDGPSIEVHNLPSDIPGYKLYMPMHVEYCDGLF-LYATCYG---IGICNPWLRQ---IRWFKSSYEGYDFSGMGYDN-SRQDKHYKILGSYCTNTTMNAS-----VTELGSDAWKSYEFAFHSWNLSMSPYSVSLNGNLYWVAYNHESRDYFIQSFDFSTVSFKHYCILPTKNGHRQCDGRSLAIFREDRFSFLEQEIYNTRNIEIWVTK 267
BLAST of CK935545 vs. ExPASy Swiss-Prot
Match: FB58_ARATH (F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 64/252 (25.40%), Postives = 107/252 (42.46%), Query Frame = 2 Query: 11 EEDGVLATNYNVSMEDLPLPILVDVFSRLPIKTILQIKCVCKTWHSLCSDPYFAKIHLA----RAPFSIMILEKFCKRIY-------------TNSLVPLFTLNQGDKERLSLLSS-CNGLICLHEFSYKQDIISVCNPILGDHLVLPQLKRKNVATRIRGF-GYNHCTNQYKVIQILSYKDQAAISSSKPQVEVHTIGTNTWRNIGDLPYVLNQPYYGAFLNSALHWYAHSHD--KRTAFMCSFDLGDEQF 703 +E L Y +P+ +L+D+FSR+P K+I + +CV K W S+ P F ++ + R P + + ++ SLVP Q + S + S G IC D + +CNP+ G+ + LP+++ K++ T R + GY+ Q KV+ I S D + + QV G + WR I P+ P + +Y D R + + FD+ E+F Sbjct: 66 QEGQPLQVGYVSCFRYIPIDLLMDIFSRVPAKSIARFRCVSKLWESILCRPDFKELFMTMSSIRPPLLLFTFQDDDGNLFFFSSPHPQIPCNENTSLVPTRYHVQHTTDSFSEIGSPLCGFIC-RRGKRNLDTMVICNPVTGESVSLPKVELKSINTETRPYLGYDPVRKQLKVLCIKS--DDIPNTCDEHQVLTLENGNHLWRTIQCKPH---YPKSDGICIDGILYYTAGFDMRARVSMVVCFDVRSEKF 311 The following BLAST results are available for this feature:
BLAST of CK935545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935545 ID=CK935545; Name=CK935545; organism=Citrus sinensis; type=EST; length=890bpback to top |