CK936100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 4.015e-101 Identity = 182/210 (86.67%), Postives = 188/210 (89.52%), Query Frame = 2 Query: 77 TDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 TDFD FQK +K AKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYKFDMS+ IYHAT RD ASGGVASVY+VGP GW KLSGDD Sbjct: 39 TDFDGFQKKAVEMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWTKLSGDD 248
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 4.015e-101 Identity = 181/209 (86.60%), Postives = 188/209 (89.95%), Query Frame = 2 Query: 80 DFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 +FD FQK K LKHAKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG RFSVGSGSPYAYGVLDSGYK+DMS+ IYHAT RD ASGGVASVY+VGP GW KLSGDD Sbjct: 40 EFDGFQKKAKDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWTKLSGDD 248
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 1.992e-100 Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 2 Query: 77 TDFDEFQKDTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 TDFD FQK+ +K AKGTTTLAFIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFSVGSGSPYAYGVLD+GYK+DM++ IYHAT RD ASGGV SVY+VGP+GWKK++GDD Sbjct: 37 TDFDGFQKEAVQMVKPAKGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKVTGDD 246
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_MOUSE (Proteasome subunit beta type-5 OS=Mus musculus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 258.84 bits (660), Expect = 2.011e-68 Identity = 123/192 (64.06%), Postives = 149/192 (77.60%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YAYGV+D GY +D+ + IY AT RDA SGG ++Y+V +GW ++S D+ Sbjct: 59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDN 250
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_BOVIN (Proteasome subunit beta type-5 OS=Bos taurus GN=PSMB5 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.011e-68 Identity = 123/192 (64.06%), Postives = 149/192 (77.60%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT RDA SGG S+Y+V +GW ++S D+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHVREDGWIRVSSDN 250
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_PONAB (Proteasome subunit beta type-5 OS=Pongo abelii GN=PSMB5 PE=2 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 2.626e-68 Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT RDA SGG ++Y+V +GW ++S D+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDN 250
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_HUMAN (Proteasome subunit beta type-5 OS=Homo sapiens GN=PSMB5 PE=1 SV=3) HSP 1 Score: 258.455 bits (659), Expect = 2.626e-68 Identity = 122/192 (63.54%), Postives = 149/192 (77.60%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G FSVGSGS YAYGV+D GY +D+ + IY AT RDA SGG ++Y+V +GW ++S D+ Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDN 250
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_RAT (Proteasome subunit beta type-5 OS=Rattus norvegicus GN=Psmb5 PE=1 SV=3) HSP 1 Score: 257.684 bits (657), Expect = 4.480e-68 Identity = 122/192 (63.54%), Postives = 150/192 (78.12%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L +CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ GT FSVGSGS YA+GV+D GY +D+ + IY AT RDA SGG ++Y+V +GW ++S D+ Sbjct: 59 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDN 250
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.642e-68 Identity = 121/197 (61.42%), Postives = 153/197 (77.66%), Query Frame = 2 Query: 116 LKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 L+ A GTTTLAF++ G++V+ DS+++ G Y++S+SVKK+IEI P +LGTMAGGAADC FW R LG +CRL+EL NK ISV ASK+LANI+YSY+G GLS+GTMI GWD+TGP LYYVD++G RL G RFS GSGS YAYGVLD+G+K+DM+ +YHAT RDA SGG +VY+V +GWKK+S DD Sbjct: 57 LEFAHGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGWKKISSDD 253
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB5_CHICK (Proteasome subunit beta type-5 (Fragment) OS=Gallus gallus GN=PSMB5 PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 2.301e-64 Identity = 119/192 (61.98%), Postives = 144/192 (75.00%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L +CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG R+ G F+VGSGS YAYGVLD G + DM+ I+ A RDA SGG +VY+VGP GW+++S D Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRRVSSHD 246 The following BLAST results are available for this feature:
BLAST of CK936100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936100 ID=CK936100; Name=CK936100; organism=Citrus sinensis; type=EST; length=708bpback to top |