CK936103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.832e-28 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 2 Query: 155 SESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG---GLFPSLFNIQF-HGLMP 637 + T PS+ P+ N +++ FECNIC + A+D +V+LCGHLFCWPCL +WL ++Q CPVCK+ + K+VP+YGRG +DPR K +P RP GQR E PPP++ N +F+ G G GLFP +F + F G+ P Sbjct: 2 ASETKAPSEEPTSSSNK-DESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE--PPPQSFAGFNWGGDGGMMGGGGPNV---HFSFGIGTVNGLFPLMFMLPFIQGIFP 154
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.076e-27 Identity = 72/174 (41.38%), Postives = 92/174 (52.87%), Query Frame = 2 Query: 140 MASGFSESTSVPSQN----PSCVGNSANDAGG----FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 MAS ++S P + PS N A ++GG FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 1 MASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 153
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.406e-27 Identity = 71/174 (40.80%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 137 LMASGFSESTSVPSQN---PSCVGNSANDAGG----FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 + + G S S S + N PS N ++GG FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 1 MASKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 153
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27 Identity = 68/165 (41.21%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 143 ASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 AS + S PS + + G S FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 10 ASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 153
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27 Identity = 68/165 (41.21%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 143 ASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 AS + S PS + + G S FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 10 ASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 153
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.836e-27 Identity = 70/172 (40.70%), Postives = 91/172 (52.91%), Query Frame = 2 Query: 143 ASGFSESTSVPSQNPSCVGNSANDAGG-------FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 A+ S S+S S + G SA ++GG FECNIC + ++D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 5 AASESSSSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 155
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.341e-27 Identity = 70/167 (41.92%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 143 ASGFSESTSVPSQNPSC--VGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKT-QTDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFPNXXXXXXXXXXXXATARIGNFTMGFG------GLFPSLFNI 616 AS S ST S + S G++ N FECNIC + A+D +++LCGHLFCWPCL++WL + Q CPVCKA + +K++PLYGRG T Q DPR K+ P RP GQRPE P F G F M FG G+F + FNI Sbjct: 10 ASTKSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRGGFQGFGFGD------------GGFQMSFGIGAFPFGIFATAFNI 155
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 140 MASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 511 MA+ E N G SA FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 1 MAAAEEEDGGPEGPNRERGGASAT----FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 140 MASGFSESTSVPSQNPSCVGNSANDAGGFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 511 MA+ E N G SA FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 1 MAAAEEEDGGPEGPNRERGGASAT----FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113
BLAST of CK936103 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 224 FECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKAVVQEEKLVPLYGRGKTQ-TDPRSKSYPGIDIPSRPAGQRPETAPPPEASYFP 511 FECNIC E A++ +V++CGHL+CWPCL++WL QECPVCKA + EK+VPLYGRG + DPR K+ P RP GQRP AP + P Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP--APESRGGFQP 113 The following BLAST results are available for this feature:
BLAST of CK936103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936103 ID=CK936103; Name=CK936103; organism=Citrus sinensis; type=EST; length=867bpback to top |