EY736111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.923e-72 Identity = 117/155 (75.48%), Postives = 134/155 (86.45%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIPT 482 MASSMISS TVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+ASNGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YL+ GWIPCLEFELE +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ PT Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPT 155 HSP 2 Score: 47.3654 bits (111), Expect = 1.923e-72 Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPP 558 E K YP S +RIIG +KRQVQCISF+A KPP Sbjct: 148 EASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.469e-69 Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEV 455 MASSM+S+ VA NRAS AQASMVAPFTGLKS+SAFP T+KT DITSIASNGGRVQCM+VWPP G K +ETLSYLPPL+ E L KE+ YLLR GW+PCLEFELE G VYRE+H SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQEL 146 HSP 2 Score: 42.743 bits (99), Expect = 1.469e-69 Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E+ K YP + RIIG + RQVQCISFLA KP G Sbjct: 148 EMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 9.424e-69 Identity = 112/155 (72.26%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 153 HSP 2 Score: 44.2838 bits (103), Expect = 9.424e-69 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP +++RIIG + RQVQCISF+A KP G Sbjct: 147 EAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 2.726e-68 Identity = 113/159 (71.07%), Postives = 131/159 (82.39%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP-TFIR 491 MASSMISS T+AT N +S AQA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLP L+ L KE+ YLLRS WIPCLEFELE+G+V+R++ S P YYDGRYWTMWKLPM+GCTD+ QVL+E+ P FIR Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIR 159 HSP 2 Score: 47.3654 bits (111), Expect = 2.726e-68 Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 1 Query: 469 KEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 KEYP++F+RIIG + RQVQCISF+A KP G Sbjct: 151 KEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.726e-68 Identity = 111/154 (72.08%), Postives = 129/154 (83.77%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YLL+SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYP 152 HSP 2 Score: 44.669 bits (104), Expect = 2.726e-68 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP ++VRIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.554e-68 Identity = 112/155 (72.26%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YLL++GW+PCLEFE E G+VYREH+SSPGYYDGRYWTMWKLPM+GCTD TQVL EV P Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYP 153 HSP 2 Score: 42.3578 bits (98), Expect = 3.554e-68 Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E YP +++RIIG + RQVQCISF+A KP G Sbjct: 147 EAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 6.045e-68 Identity = 111/155 (71.61%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E+G+VYRE++SSPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 153 HSP 2 Score: 44.669 bits (104), Expect = 6.045e-68 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP ++VRIIG + RQVQCISF+A KP G Sbjct: 147 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 7.885e-68 Identity = 112/154 (72.73%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS+ISS VAT R+++ QASMVAPFTGLKSS+ FP TKK N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSVISSAAVAT--RSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152 HSP 2 Score: 44.669 bits (104), Expect = 7.885e-68 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP ++VRIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.028e-67 Identity = 110/154 (71.43%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YLL GW+PCLEFE E G+VYRE+H+SP YYDGRYWTMWKLPM+GCTDATQVL E+ P Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYP 152 HSP 2 Score: 47.7506 bits (112), Expect = 1.028e-67 Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP++++RIIG + RQVQCISF+A KPPG Sbjct: 146 EAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY736111 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.974e-67 Identity = 110/154 (71.43%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 18 MASSMISSTTVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVXGGPXGIP 479 MASS++SS VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YLL++GW+PCLEFE E G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVL EV P Sbjct: 1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYP 152 HSP 2 Score: 44.669 bits (104), Expect = 2.974e-67 Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 1 Query: 460 EVXKEYPHSFVRIIGX*HKRQVQCISFLAAKPPG 561 E K YP ++VRIIG + RQVQCISF+A KP G Sbjct: 146 EAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179 The following BLAST results are available for this feature:
BLAST of EY736111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736111 ID=EY736111; Name=EY736111; organism=Citrus sinensis; type=EST; length=889bpback to top |