EY735754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_ARATH (U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.076e-63 Identity = 116/170 (68.24%), Postives = 131/170 (77.06%), Query Frame = 1 Query: 145 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRIL 654 MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKPPPEKRKCPP TGMAQFVS+FAEPGDP YAPP + P ++R RIH YDP+NDPN +GDPY TLFV+RL+YE++ESKI+REFESYGPI V ++ Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLV 170
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_MOUSE (U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus GN=Snrnp70 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22 Identity = 58/140 (41.43%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +A T ER R +DPHNDPN GD + TLFVAR++Y+TTESK++REFE YGPI + ++ + G Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSG 141
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_HUMAN (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens GN=SNRNP70 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22 Identity = 58/140 (41.43%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +A T ER R +DPHNDPN GD + TLFVAR++Y+TTESK++REFE YGPI + ++ + G Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSG 141
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_BOVIN (U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus GN=SNRNP70 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22 Identity = 58/140 (41.43%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +A T ER R +DPHNDPN GD + TLFVAR++Y+TTESK++REFE YGPI + ++ + G Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSG 141
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_XENTR (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis GN=snrnp70 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.373e-21 Identity = 57/140 (40.71%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +A T ER R +DPHND N GD + TLFVAR++Y+TTESK++REFE YGPI + ++ + + G Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSG 141
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_XENLA (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis GN=snrnp70 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.373e-21 Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRIL 654 L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +A T ER R +DPHND N GD + TLFVAR++Y+TTESK++REFE YGPI + I+ Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIV 135
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_SCHPO (U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Schizosaccharomyces pombe GN=usp101 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19 Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L A LL LF PR PL Y PP PEKR P ++G+A+++ +A+ D Y P + E+R R+ +DP +D +V GDPY T+F++RLSY+T ES I+REF YGPI +R++R+ G Sbjct: 5 LPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLK-YAQSHDQQYHP----TESLEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTG 138
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_DROME (U1 small nuclear ribonucleoprotein 70 kDa OS=Drosophila melanogaster GN=snRNP70K PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILRHPKWG 672 L NLL LF R P+ + PP P ++K G+A+F++ F +P D VE +ERR R +DP N + DP+ TLF+AR++Y+T+ESK++REFE YGPI + ++ + G Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRR---EKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESG 140
BLAST of EY735754 vs. ExPASy Swiss-Prot
Match: RU17_DICDI (U1 small nuclear ribonucleoprotein 70 kDa OS=Dictyostelium discoideum GN=snrnp70 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14 Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 268 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPG--DPLYAPPVEKAXTPVERRARIHXXXXXXXXXXXXXXXXXYDPHNDPNVSGDPYNTLFVARLSYETTESKIQREFESYGPINGVRILR 657 L NL +F PR P + PPP PP TG+ ++S F +P +P +E E+R + +DP+++ +GDPY T+FV+R+SY+TT+ K++ EF +GPI + +++ Sbjct: 4 LPPNLKIMFNPRHPPPFLPPPPPSNLPPYTGLRDYLSIFTDPSNEEPFKKEHIENLE---EKREKKRKLKISENDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLVK 132 The following BLAST results are available for this feature:
BLAST of EY735754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735754 ID=EY735754; Name=EY735754; organism=Citrus sinensis; type=EST; length=868bpback to top |