EY735466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: PRP8_MOUSE (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2) HSP 1 Score: 371.703 bits (953), Expect = 3.740e-102 Identity = 173/264 (65.53%), Postives = 210/264 (79.55%), Query Frame = 1 Query: 4 YEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMALSDRFLGFLQGSPTRAQGTILSGELKHTWSLKFGAKLGDPLKKTPRRTIGQFFFWDFTNLEEG 795 YE F SKT+WRVRAISA NL+LR NHIYV+S+DIKETGYTYI+PKN+LKKFICI+DLR QI+GYLYG+SPPDNPQVKEIRCI M PQWGTHQ VHLPS LP+H++L ++EPLGW+HTQPNE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQM LSDRFLGF P ++ ++H ++K+ +L +P K+ F +F L+EG Sbjct: 2062 YETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFM-VPAQSSWNYNFMGVRHDPNMKYELQLANP-KEFYHEVHRPSHFLNFALLQEG 2323
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: PRP8_HUMAN (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2) HSP 1 Score: 370.163 bits (949), Expect = 1.088e-101 Identity = 172/264 (65.15%), Postives = 209/264 (79.17%), Query Frame = 1 Query: 4 YEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMALSDRFLGFLQGSPTRAQGTILSGELKHTWSLKFGAKLGDPLKKTPRRTIGQFFFWDFTNLEEG 795 YE F SKT+WRVRAISA NL+LR NHIYV+S+DIKETGYTYI+PKN+LKKFICI+DLR QI+GYLYG+SPPDNPQVKEIRCI M PQWGTHQ VHLP LP+H++L ++EPLGW+HTQPNE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQM LSDRFLGF P ++ ++H ++K+ +L +P K+ F +F L+EG Sbjct: 2062 YETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFM-VPAQSSWNYNFMGVRHDPNMKYELQLANP-KEFYHEVHRPSHFLNFALLQEG 2323
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: PRP8_CAEEL (Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans GN=prp-8 PE=1 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.798e-96 Identity = 162/243 (66.67%), Postives = 197/243 (81.07%), Query Frame = 1 Query: 4 YEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMALSDRFLGFLQGSPTRAQGTILSGELKHTWS--LKFGAKLGDP 726 YE A+F S+T+WRVRAIS+TNL+LR HIYVNS+D+K+TGYTYI+PKNILKKFI I+DLRTQI+G++YG+SPPDNPQVKEIRCI + PQ G+HQQV+LP+ LP+H+ L D EPLGWMHTQPNELPQLSPQD+T+HA++L +N WDGEK +++TCSFTPGS SLTAYKLTPSGYEWG+ N D G+NP GY+PTHYEKVQM LSDRFLG+ G+ WS +KF L +P Sbjct: 2055 YETASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQ---RWSPAMKFDVCLSNP 2294
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: PRP8_DICDI (Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 5.426e-85 Identity = 155/243 (63.79%), Postives = 184/243 (75.72%), Query Frame = 1 Query: 1 PYEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETG-YTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMALSDRFLGFLQGSPTRAQGTILSGELKHTWSLKFGAKLGDP 726 P+EQ F SKTDWRVRAISATNL+LR N IYVNS++ KETG +TY+ PKNILKKFI IADLRTQI GY YGISPPDNP VKEIRCI MPPQWGT V +P+ LPEH++L DLEPLGW+HTQP ELPQLSPQD+ +H++I+ +NK WDGEK +I++ S C+LTAY LTPSG+EWG+ NKD+ N GY P YEKVQM LSDRFLGF P R +KH+ ++ +G KL P Sbjct: 2050 PHEQKVFSSKTDWRVRAISATNLHLRTNQIYVNSDNAKETGGFTYVFPKNILKKFITIADLRTQIMGYCYGISPPDNPSVKEIRCIVMPPQWGTPVHVTVPNQLPEHEYLKDLEPLGWIHTQPTELPQLSPQDVITHSKIMSDNKSWDGEKTVIISVS-VAWPCTLTAYHLTPSGFEWGKNNKDS-LNYQGYQPQFYEKVQMLLSDRFLGFYM-VPDRGSWNYNFMGVKHSTNMTYGLKLDYP 2289
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: SPP42_SCHPO (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 3.541e-60 Identity = 120/215 (55.81%), Postives = 154/215 (71.63%), Query Frame = 1 Query: 4 YEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKET-GYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHD----FLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPH-GYLPTHYEKVQMALSDRFLGF 630 YE F SKT+WR RAIS+ +L LR +IYVNS++I ET YTYI+P+N+L+KF+ I+DLRTQ++GY+YG SP DNPQ+KEIRCIA+ PQ G+ + V LPS LP HD L DLEPLGW+HTQ +ELP LS D+T+HA+IL ++ +WD K + LT S+ PGS SL AY ++ G EWG N D S+ GY P+ EK Q+ LSDR GF Sbjct: 2086 YENEKFSSKTEWRNRAISSISLPLRTKNIYVNSDNISETFPYTYILPQNLLRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRNVQLPSKLP-HDLQPSILEDLEPLGWIHTQSSELPYLSSVDVTTHAKILSSHPEWD-TKAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQGF 2298
BLAST of EY735466 vs. ExPASy Swiss-Prot
Match: PRP8_YEAST (Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae GN=PRP8 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 5.317e-40 Identity = 88/212 (41.51%), Postives = 131/212 (61.79%), Query Frame = 1 Query: 4 YEQAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLND---LEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKD-TGSNPHGYLPTHYEKVQMALSDRFLG 627 YE F SK +WR AI+ T LYLR+ +IYV+++D E Y++PKN+LKKFI I+D++ Q++ ++YG+S D+P+VKEI+ + + PQ G V + S +P+ L D LE LGW+HTQ EL ++ ++ +H+++ + K+ CI ++ TPGS SL+AY LT GY+WG NKD G+ PT Q+ LSDR G Sbjct: 2141 YESQTFSSKNEWRKSAIANTLLYLRLKNIYVSADDFVEEQNVYVLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQI-SNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKLFADKKR----DCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLLLSDRITG 2347 The following BLAST results are available for this feature:
BLAST of EY735466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735466 ID=EY735466; Name=EY735466; organism=Citrus sinensis; type=EST; length=1007bpback to top |