EY735438
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1B_ARATH (E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 5.906e-41 Identity = 104/207 (50.24%), Postives = 138/207 (66.67%), Query Frame = 2 Query: 11 KIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQSFSTLRKTGTGKATSQNFMLLVEPAKLRFPLTEKRMKA*FEK 631 +IKSLKALIEKL K+KL+ Q + + +E D R L EIK+S+R+A +QAE LKN LDEH LELRVKAA+E E+ACQ+RL+ A+AEI EL +LD SER+V+EL+E +K K++EAEA IAEMET GQA+ + ++ L ++ E+D+ NI LVS SVKTK + K K Q VE K R E++MK F + Sbjct: 538 EIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIKDSQRKAQAQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSEREVLELKEGIKVKEQEAEASIAEMETIGQAYEDMQTQNQHL-LQQVAERDDYNIKLVSESVKTKHAYNTHLSEKQVMEKQLHQ-VNASVENFKARIAHNEEQMKGCFSE 742
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.931e-40 Identity = 97/202 (48.02%), Postives = 139/202 (68.81%), Query Frame = 2 Query: 11 KIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQSFSTLRKTGTGKATSQNFMLLVEPAKLRFPLTEKRMK 616 +IKSLKALIE L ++K E Q ++DM G+E + R + EI+ESE RA QAE L+ L+EH+LELRVKAANEAE ACQQRLS AEAE+ +L AK+DASERDVM+L+E+++ K+ E + +I+E+ET GQA+ + ++ L ++ ++D+ NI LVS SVK K S L + + Q+ +E +KL+ E++MK Sbjct: 482 EIKSLKALIETLDQEKQELQFIVDMLGKECSESRAISEIEESENRARKQAEYLRKCLEEHNLELRVKAANEAETACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVDGHISEIETIGQAYEDMQTQNQHL-LQQVADRDDFNIKLVSDSVKMKQAYG-SLLAEKNMLQKQLQHVNSSLESSKLKITSGEEQMK 681
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSI (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.931e-40 Identity = 97/202 (48.02%), Postives = 139/202 (68.81%), Query Frame = 2 Query: 11 KIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQSFSTLRKTGTGKATSQNFMLLVEPAKLRFPLTEKRMK 616 +IKSLKALIE L ++K E Q ++DM G+E + R + EI+ESE RA QAE L+ L+EH+LELRVKAANEAE ACQQRLS AEAE+ +L AK+DASERDVM+L+E+++ K+ E + +I+E+ET GQA+ + ++ L ++ ++D+ NI LVS SVK K S L + + Q+ +E +KL+ E++MK Sbjct: 482 EIKSLKALIETLDQEKQELQFIVDMLGKECSESRAISEIEESENRARKQAEYLRKCLEEHNLELRVKAANEAETACQQRLSIAEAELEDLRAKVDASERDVMKLKESIRIKEAEVDGHISEIETIGQAYEDMQTQNQHL-LQQVADRDDFNIKLVSDSVKMKQAYG-SLLAEKNMLQKQLQHVNSSLESSKLKITSGEEQMK 681
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1A_ARATH (E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.409e-26 Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 11 KIKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQ 505 ++ L A + L+ E ++ LDMY +E D RD+ E KE E RA + + LK++LDE +LELRVKAANEAEA QQ L+AAEAEI +L K+D +RDV + + +KSK E Y++E++T G A+ I + L ++ E+D+ NI L + ++ +Q Sbjct: 515 QLGDLNATVCDLKNSHEELKLFLDMYKRESTDARDIAEAKEQEYRAWAHVQSLKSSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQKMDDCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYEDIVPQNQQL-LLQVTERDDYNIKLFLEGITSRQMQ 678
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1A_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 5.023e-24 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 14 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQ 505 I L+++I L++ E ++ DMY +E D R++ME ++ E + LK++LDE LE RVKAANEAEA QQRL+ AEAEI E KL S +D++ L +KSK E EAY E+E GQA+ I + L ++ E+D+ N + VK K Q Sbjct: 522 ITQLQSVISDLKQTNKELKLFADMYKRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRLATAEAEIAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQL-LQQIIERDDDNTKIFMEGVKAKQTQ 684
BLAST of EY735438 vs. ExPASy Swiss-Prot
Match: BRE1A_ORYSI (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. indica GN=BRE1A PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 5.023e-24 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 14 IKSLKALIEKLQKDKLESQIMLDMYGQEGRDPRDLMEIKESERRAHSQAEVLKNALDEHSLELRVKAANEAEAACQQRLSAAEAEIIELVAKLDASERDVMELEEAMKSKDREAEAYIAEMETFGQAFLKICRH*TNIWLCKMDEKDELNINLVS*SVKTKTVQ 505 I L+++I L++ E ++ DMY +E D R++ME ++ E + LK++LDE LE RVKAANEAEA QQRL+ AEAEI E KL S +D++ L +KSK E EAY E+E GQA+ I + L ++ E+D+ N + VK K Q Sbjct: 522 ITQLQSVISDLKQTNKELKLFADMYKRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRLATAEAEIAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQL-LQQIIERDDDNTKIFMEGVKAKQTQ 684 The following BLAST results are available for this feature:
BLAST of EY735438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735438 ID=EY735438; Name=EY735438; organism=Citrus sinensis; type=EST; length=967bpback to top |