EY735002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_NICBE (Squalene synthetase OS=Nicotiana benthamiana PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.981e-61 Identity = 111/134 (82.84%), Postives = 123/134 (91.79%), Query Frame = 3 Query: 126 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 MGSL A+L++P+DLYPL+KLK+A+R AEKQIPP P+W FCYSMLHKVSRSFAL IQQL +LR+AVCIFYL LRAL TVEDDTSIPTDVKVPILI+FH+HVYDREWH SCGTKEYKVLMDQFHHVSTAFLEL K Sbjct: 1 MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPNWGFCYSMLHKVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELRK 134
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_ARATH (Squalene synthetase OS=Arabidopsis thaliana GN=SQS1 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.981e-61 Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = 3 Query: 126 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAFCYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGKGW 533 MGSL +LR+PDD+YPLLK+K A +AEKQIPPEPHW FCYSMLHKVSRSF+L IQQL T+LRNAVC+FYL LRAL TVEDDTSIPTD KVPILI FHRH+YD +WH SCGTKEYK+LMDQFHHVS AFLEL KG+ Sbjct: 1 MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMDQFHHVSAAFLELEKGY 136
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_MOUSE (Squalene synthetase OS=Mus musculus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19 Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQ----AEKQIPPEPHWAFCYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 L HP++ Y LL+ +M R+ Q CY L++ SRSFA IQ L D+R+A+C+FYL LRAL TVEDD SI + K+P+L FH +YD EW + ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFRMGGRRNFIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGDIRHAICVFYLVLRALDTVEDDMSISVEKKIPLLCNFHTFLYDPEWRFTESKEKDRQVLEDFPTISLEFRNLAE 137
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_RAT (Squalene synthetase OS=Rattus norvegicus GN=Fdft1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19 Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 L HP++ Y LL+ +M R+ IP + CY L + SRSFA IQ L D+R+AVC+FYL LRA+ TVEDD +I + K+P+L FH +Y+ EW + ++++V+++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFRMGGRR--NFIPKMDRNSLSNSLKTCYKYLDQTSRSFAAVIQALDGDIRHAVCVFYLILRAMDTVEDDMAISVEKKIPLLRNFHTFLYEPEWRFTESKEKHRVVLEDFPTISLEFRNLAE 137
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_BOVIN (Squalene synthetase OS=Bos taurus GN=FDFT1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18 Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 L HP++ Y LL+ +M R+ K IP + CY L++ SRSFA IQ L ++R+AVCIFYL LRAL T+EDD +I + KVP+L FH ++Y+ +W + ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLLRFQMGGRR--KVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAE 137
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_PONAB (Squalene synthetase OS=Pongo abelii GN=FDFT1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 L HP++ Y L++ ++ ++ K +P + CY L++ SRSFA IQ L ++RNAVCIFYL LRAL T+EDD +I + KVP+L FH +Y +W ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAE 137
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_HUMAN (Squalene synthetase OS=Homo sapiens GN=FDFT1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.845e-17 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF------CYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYKVLMDQFHHVSTAFLELGK 527 L HP++ Y L++ ++ ++ K +P + CY L++ SRSFA IQ L ++RNAVCIFYL LRAL T+EDD +I + KVP+L FH +Y +W ++ + +++ F +S F L + Sbjct: 7 LGHPEEFYNLVRFRIGGKR--KVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAE 137
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_DICDI (Squalene synthetase OS=Dictyostelium discoideum GN=fdfT PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 147 LRHPDDLYPLLKLKMASRQAEKQIPPEP--HWAFCYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHL-SCG-TKEYKVLMDQFHHVSTAFLELGKGW 533 L HPD+ LLK+ K E + +CY +L+K SRSFA I +L L++A+CIFYL LR L T+EDDT++ + K+P+L +F +Y + + G + K L++ F V FL LG G+ Sbjct: 7 LAHPDEFLSLLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELEPSLKDAICIFYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKNLVENFDKVVDVFLGLGDGY 139
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_PICJA (Squalene synthetase OS=Pichia jadinii GN=ERG9 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.854e-15 Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 126 MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPPEPHWAF--CYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLS---------CGTKEYKVLMDQFHHVSTAFLELGK 527 MG L + HPD+L +++ K+ + + P CY +L+ SRSFA I++L +LRN + +FYL LRAL TVE D SI VK+P+L FH + ++W C E+ ++ Q+H + + ++ K Sbjct: 1 MGKLLQLALHPDELASIVQFKLFRKNENARNPATESAELIRCYELLNLTSRSFAAVIEELHPELRNVIMVFYLVLRALDTVEVDMSIENSVKLPVLRQFHEKLDTKDWTFDGNSPNEKDRCVLVEFDRILGQYHELKPQYQKVIK 145
BLAST of EY735002 vs. ExPASy Swiss-Prot
Match: FDFT_YEAST (Squalene synthetase OS=Saccharomyces cerevisiae GN=ERG9 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 3 Query: 126 MGSLAAVLRHPDDLYPLLKLKMASRQAEK--QIPPEPHWAFCYSMLHKVSRSFALDIQQLGTDLRNAVCIFYLGLRALYTVEDDTSIPTDVKVPILITFHRHVYDREWHLSCGTKEYK---VLMD------QFHHVSTAFLELGK 527 MG L + HP ++ LKLK P+ C+ +L+ SRSFA I++L +LRN V +FYL LRAL T+EDD SI D+K+ +L FH + +W + K VL D +FH + + E+ K Sbjct: 1 MGKLLQLALHPVEMKAALKLKFCRTPLFSIYDQSTSPYLLHCFELLNLTSRSFAAVIRELHPELRNCVTLFYLILRALDTIEDDMSIEHDLKIDLLRHFHEKLLLTKWSFDGNAPDVKDRAVLTDFESILIEFHKLKPEYQEVIK 145 The following BLAST results are available for this feature:
BLAST of EY735002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735002 ID=EY735002; Name=EY735002; organism=Citrus sinensis; type=EST; length=885bpback to top |