EY734952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: PRP8_MOUSE (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2) HSP 1 Score: 446.047 bits (1146), Expect = 1.251e-124 Identity = 196/269 (72.86%), Postives = 234/269 (86.99%), Query Frame = 3 Query: 33 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTLEEGEMAXGDREDTFS 839 F SKT+WRVRAISA NL+LR NHIYV+S+DIKETGYTYI+PKN+LKKFICI+DLR QI+GYLYG+SPPDNPQVKEIRCI M PQWGTHQ VHLPS LP+H++L ++EPLGW+HTQPNE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HR +HFL F+ L+EGE+ DRED ++ Sbjct: 2067 FSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPSQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: PRP8_HUMAN (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2) HSP 1 Score: 444.506 bits (1142), Expect = 3.639e-124 Identity = 195/269 (72.49%), Postives = 233/269 (86.62%), Query Frame = 3 Query: 33 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTLEEGEMAXGDREDTFS 839 F SKT+WRVRAISA NL+LR NHIYV+S+DIKETGYTYI+PKN+LKKFICI+DLR QI+GYLYG+SPPDNPQVKEIRCI M PQWGTHQ VHLP LP+H++L ++EPLGW+HTQPNE PQLSPQD+T+HA+I+ +N WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HR +HFL F+ L+EGE+ DRED ++ Sbjct: 2067 FSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: PRP8_CAEEL (Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans GN=prp-8 PE=1 SV=1) HSP 1 Score: 417.927 bits (1073), Expect = 3.648e-116 Identity = 186/272 (68.38%), Postives = 227/272 (83.46%), Query Frame = 3 Query: 27 AAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTLEEG-EMAXGDREDTFS 839 A+F S+T+WRVRAIS+TNL+LR HIYVNS+D+K+TGYTYI+PKNILKKFI I+DLRTQI+G++YG+SPPDNPQVKEIRCI + PQ G+HQQV+LP+ LP+H+ L D EPLGWMHTQPNELPQLSPQD+T+HA++L +N WDGEK +++TCSFTPGS SLTAYKLTPSGYEWG+ N D G+NP GY+PTHYEKVQMLLSDRFLG++MVP NG WNYNF G + + +MK+ V L P+EYYHEDHR HF F ++ DRED F+ Sbjct: 2058 ASFASRTEWRVRAISSTNLHLRTQHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA 2329
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: PRP8_DICDI (Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 3.915e-102 Identity = 174/258 (67.44%), Postives = 205/258 (79.46%), Query Frame = 3 Query: 24 QAAFGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETG-YTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTL 794 Q F SKTDWRVRAISATNL+LR N IYVNS++ KETG +TY+ PKNILKKFI IADLRTQI GY YGISPPDNP VKEIRCI MPPQWGT V +P+ LPEH++L DLEPLGW+HTQP ELPQLSPQD+ +H++I+ +NK WDGEK +I++ S C+LTAY LTPSG+EWG+ NKD+ N GY P YEKVQMLLSDRFLGFYMVPD G WNYNFMGVKH+ +M YG+KL P+ +Y E HR HF ++ + Sbjct: 2053 QKVFSSKTDWRVRAISATNLHLRTNQIYVNSDNAKETGGFTYVFPKNILKKFITIADLRTQIMGYCYGISPPDNPSVKEIRCIVMPPQWGTPVHVTVPNQLPEHEYLKDLEPLGWIHTQPTELPQLSPQDVITHSKIMSDNKSWDGEKTVIISVS-VAWPCTLTAYHLTPSGFEWGKNNKDS-LNYQGYQPQFYEKVQMLLSDRFLGFYMVPDRGSWNYNFMGVKHSTNMTYGLKLDYPKNFYDESHRPAHFQNWTQM 2308
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: SPP42_SCHPO (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.074e-75 Identity = 142/275 (51.64%), Postives = 189/275 (68.73%), Query Frame = 3 Query: 33 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKET-GYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHD----FLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPH-GYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTLEEGEMAXGDREDTFS 839 F SKT+WR RAIS+ +L LR +IYVNS++I ET YTYI+P+N+L+KF+ I+DLRTQ++GY+YG SP DNPQ+KEIRCIA+ PQ G+ + V LPS LP HD L DLEPLGW+HTQ +ELP LS D+T+HA+IL ++ +WD K + LT S+ PGS SL AY ++ G EWG N D S+ GY P+ EK Q+LLSDR GF++VP+ G WNYNF G + M Y +KL P ++ +HR TH + ++ LE + D D F+ Sbjct: 2091 FSSKTEWRNRAISSISLPLRTKNIYVNSDNISETFPYTYILPQNLLRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRNVQLPSKLP-HDLQPSILEDLEPLGWIHTQSSELPYLSSVDVTTHAKILSSHPEWD-TKAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQGFFLVPEEGVWNYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVISYTELETNDRLEEDMPDAFA 2363
BLAST of EY734952 vs. ExPASy Swiss-Prot
Match: PRP8_YEAST (Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae GN=PRP8 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.105e-55 Identity = 113/273 (41.39%), Postives = 164/273 (60.07%), Query Frame = 3 Query: 33 FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLND---LEPLGWMHTQPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKD-TGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRATHFLEFSTLEEGEMAXGDREDTFS 839 F SK +WR AI+ T LYLR+ +IYV+++D E Y++PKN+LKKFI I+D++ Q++ ++YG+S D+P+VKEI+ + + PQ G V + S +P+ L D LE LGW+HTQ EL ++ ++ +H+++ + K+ CI ++ TPGS SL+AY LT GY+WG NKD G+ PT Q+LLSDR G +++P WNY FMG Y K G P E+Y+E HR HFL+FS L E ++ D FS Sbjct: 2146 FSSKNEWRKSAIANTLLYLRLKNIYVSADDFVEEQNVYVLPKNLLKKFIEISDVKIQVAAFIYGMSAKDHPKVKEIKTVVLVPQLGHVGSVQI-SNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKLFADKKR----DCIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLLLSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFLQFSELAGDEELEAEQIDVFS 2413 The following BLAST results are available for this feature:
BLAST of EY734952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY734952 ID=EY734952; Name=EY734952; organism=Citrus sinensis; type=EST; length=873bpback to top |